Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_034395354.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Delftia]
...
Query length:
490 aa
DOMAINS: and other(s) domains
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Clostridioides difficile]
452 aa protein
accession:WP_003436249.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Bacillaceae]
459 aa protein
accession:WP_003233892.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Escherichia coli]
433 aa protein
accession:WP_000046824.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Shewanella oneidensis]
449 aa protein
accession:WP_011073303.1
Query: 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Delftia]
490 aa protein
accession:WP_034395354.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Pseudomonas]
450 aa protein
accession:WP_003102417.1
DOMAINS: and other(s) domains
...
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Clostridioides difficile]
452 aa protein
accession:WP_003436249.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Bacillaceae]
459 aa protein
accession:WP_003233892.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Escherichia coli]
433 aa protein
accession:WP_000046824.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Shewanella oneidensis]
449 aa protein
accession:WP_011073303.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Delftia]
490 aa protein
accession:WP_034395354.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Pseudomonas]
450 aa protein
accession:WP_003102417.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 272 | 272 | 96% | 6e-85 | 36.13% | WP_003102417.1 | |
| 2 | 253 | 253 | 93% | 7e-78 | 35.65% | WP_000046824.1 | |
| 3 | 226 | 226 | 93% | 2e-67 | 31.57% | WP_011073303.1 | |
| 4 | 159 | 159 | 92% | 3e-42 | 26.69% | WP_003436249.1 | |
| 5 | 149 | 149 | 90% | 2e-38 | 26.23% | WP_003233892.1 |