Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_038875105.1
TolC family protein [Serratia]
...
Query length:
471 aa
DOMAINS: and other(s) domains
...
efflux transporter outer membrane subunit
...
efflux transporter outer membrane subunit [Shewanella oneidensis]
472 aa protein
accession:WP_011071116.1
multidrug efflux transporter outer membrane subunit MtrE
...
multidrug efflux transporter outer membrane subunit MtrE [Neisseria meningitidis]
467 aa protein
accession:WP_002237303.1
efflux transporter outer membrane subunit
...
efflux transporter outer membrane subunit [Escherichia coli]
457 aa protein
accession:WP_000946218.1
pyoverdine export/recycling transporter outer membrane subunit OmpQ
...
pyoverdine export/recycling transporter outer membrane subunit OmpQ [Pseudomonas aeruginosa]
474 aa protein
accession:WP_010895610.1
multidrug efflux RND transporter outer membrane subunit OpmB
...
multidrug efflux RND transporter outer membrane subunit OpmB [Pseudomonas]
498 aa protein
accession:WP_003089909.1
DOMAINS: and other(s) domains
...
efflux transporter outer membrane subunit [Shewanella oneidensis]
472 aa protein
accession:WP_011071116.1
multidrug efflux transporter outer membrane subunit MtrE [Neisseria meningitidis]
467 aa protein
accession:WP_002237303.1
efflux transporter outer membrane subunit [Escherichia coli]
457 aa protein
accession:WP_000946218.1
pyoverdine export/recycling transporter outer membrane subunit OmpQ [Pseudomonas aeruginosa]
474 aa protein
accession:WP_010895610.1
multidrug efflux RND transporter outer membrane subunit OpmB [Pseudomonas]
498 aa protein
accession:WP_003089909.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 120 | 120 | 95% | 5e-28 | 27.02% | WP_011071116.1 | |
| 2 | 106 | 106 | 91% | 3e-23 | 24.89% | WP_003089909.1 | |
| 3 | 99.4 | 99.4 | 85% | 6e-21 | 24.88% | WP_002237303.1 | |
| 4 | 97.1 | 97.1 | 93% | 4e-20 | 28.27% | WP_010895610.1 | |
| 5 | 96.7 | 96.7 | 84% | 4e-20 | 23.57% | WP_000946218.1 |