Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_042229225.1 helix-turn-helix domain-containing protein [Paenibacillus chitinolyticus] ... Query length: 750 aa

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Bacillus]

772 aa protein

accession:WP_009968004.1

Alignment Sequence Identical proteins

transcriptional regulator YesS ...

transcriptional regulator YesS [Bacillus subtilis]

761 aa protein

accession:WP_009966769.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Synechocystis salina]

144 aa protein

accession:WP_194019222.1

Alignment Sequence Identical proteins

transcriptional regulator MdrR1 ...

transcriptional regulator MdrR1 [Pseudomonas aeruginosa]

293 aa protein

accession:WP_010895665.1

Alignment Sequence Identical proteins

Query: helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Paenibacillus chitinolyticus]

750 aa protein

accession:WP_042229225.1

Sequence Identical proteins

MDR efflux pump AcrAB transcriptional activator MarA ...

MDR efflux pump AcrAB transcriptional activator MarA [Enterobacteriaceae]

127 aa protein

accession:WP_000091199.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_009968004.1\|	helix-turn-helix domain-containing protein [Bacillus]	77.8	77.8	64%	9e-14	21.63%	WP_009968004.1
2 Select seq ref\|WP_194019222.1\|	AraC family transcriptional regulator [Synechocystis salina]	69.3	69.3	13%	7e-13	32.67%	WP_194019222.1
3 Select seq ref\|WP_000091199.1\|	MDR efflux pump AcrAB transcriptional activator MarA [Enterobacteriaceae]	66.2	66.2	14%	5e-12	37.61%	WP_000091199.1
4 Select seq ref\|WP_009966769.1\|	transcriptional regulator YesS [Bacillus subtilis]	68.2	68.2	15%	1e-10	33.04%	WP_009966769.1
5 Select seq ref\|WP_010895665.1\|	transcriptional regulator MdrR1 [Pseudomonas aeruginosa]	58.2	58.2	13%	4e-08	28.57%	WP_010895665.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments