Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_044228747.1 rhomboid family intramembrane serine protease [Coprobacter secundus] ... Query length: 200 aa

rhomboid protease PCP1 ...

rhomboid protease PCP1 [Saccharomyces cerevisiae S288C]

346 aa protein

accession:NP_011615.1

Alignment Sequence Identical proteins

rhomboid family intramembrane serine protease ...

rhomboid family intramembrane serine protease [Thermotoga maritima]

235 aa protein

accession:WP_004081273.1

Alignment Sequence Identical proteins

rhomboid family intramembrane serine protease ...

rhomboid family intramembrane serine protease [Streptomyces]

297 aa protein

accession:WP_003975079.1

Alignment Sequence Identical proteins

Query: rhomboid family intramembrane serine protease ...

rhomboid family intramembrane serine protease [Coprobacter secundus]

200 aa protein

accession:WP_044228747.1

Sequence Identical proteins

RHOMBOID-like protein 12 ...

RHOMBOID-like protein 12 [Arabidopsis thaliana]

336 aa protein

accession:NP_564058.1

Alignment Sequence Identical proteins

RHOMBOID-like protein 12, mitochondrial ...

RHOMBOID-like protein 12, mitochondrial [Glycine max]

336 aa protein

accession:XP_003525439.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_564058.1\|	RHOMBOID-like protein 12 [Arabidopsis thaliana]	58.5	58.5	87%	6e-09	28.88%	NP_564058.1
2 Select seq ref\|NP_011615.1\|	rhomboid protease PCP1 [Saccharomyces cerevisiae S288C]	53.9	53.9	69%	2e-07	30.34%	NP_011615.1
3 Select seq ref\|XP_003525439.1\|	RHOMBOID-like protein 12, mitochondrial [Glycine max]	53.5	53.5	85%	3e-07	26.23%	XP_003525439.1
4 Select seq ref\|WP_004081273.1\|	rhomboid family intramembrane serine protease [Thermotoga maritima]	52.0	52.0	76%	6e-07	27.92%	WP_004081273.1
5 Select seq ref\|WP_003975079.1\|	rhomboid family intramembrane serine protease [Streptomyces]	52.4	52.4	59%	7e-07	30.30%	WP_003975079.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments