Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_065924023.1
type III secretion system outer membrane ring subunit SctC [Pseudomonas]
...
Query length:
707 aa
DOMAINS: and other(s) domains
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GspD family T2SS secretin variant XcpQ
...
GspD family T2SS secretin variant XcpQ [Pseudomonas aeruginosa]
658 aa protein
accession:WP_003113934.1
type IV pilus secretin PilQ
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type IV pilus secretin PilQ [Neisseria meningitidis]
769 aa protein
accession:WP_002261352.1
type IV pilus secretin PilQ
...
type IV pilus secretin PilQ [Shewanella oneidensis]
684 aa protein
accession:WP_011070657.1
Query: type III secretion system outer membrane ring subunit SctC
...
type III secretion system outer membrane ring subunit SctC [Pseudomonas]
707 aa protein
accession:WP_065924023.1
type III secretion system LEE outer membrane ring protein EscC
...
type III secretion system LEE outer membrane ring protein EscC [Escherichia coli]
512 aa protein
accession:WP_000723942.1
SctC family type III secretion system outer membrane ring subunit PscC
...
SctC family type III secretion system outer membrane ring subunit PscC [Pseudomonas]
600 aa protein
accession:WP_003100753.1
DOMAINS: and other(s) domains
...
GspD family T2SS secretin variant XcpQ [Pseudomonas aeruginosa]
658 aa protein
accession:WP_003113934.1
type IV pilus secretin PilQ [Neisseria meningitidis]
769 aa protein
accession:WP_002261352.1
type IV pilus secretin PilQ [Shewanella oneidensis]
684 aa protein
accession:WP_011070657.1
type III secretion system outer membrane ring subunit SctC [Pseudomonas]
707 aa protein
accession:WP_065924023.1
type III secretion system LEE outer membrane ring protein EscC [Escherichia coli]
512 aa protein
accession:WP_000723942.1
SctC family type III secretion system outer membrane ring subunit PscC [Pseudomonas]
600 aa protein
accession:WP_003100753.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 212 | 212 | 74% | 1e-58 | 29.61% | WP_003100753.1 | |
| 2 | 175 | 175 | 68% | 4e-46 | 26.27% | WP_000723942.1 | |
| 3 | 82.0 | 82.0 | 39% | 1e-14 | 27.99% | WP_002261352.1 | |
| 4 | 70.9 | 70.9 | 36% | 3e-11 | 28.42% | WP_003113934.1 | |
| 5 | 64.7 | 64.7 | 36% | 3e-09 | 24.50% | WP_011070657.1 |