Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_080571544.1 helix-turn-helix domain-containing protein [Pseudoalteromonas mariniglutinosa] ... Query length: 89 aa

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Synechocystis salina]

290 aa protein

accession:WP_194020559.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Bacillus]

275 aa protein

accession:WP_003246321.1

Alignment Sequence Identical proteins

Query: helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Pseudoalteromonas mariniglutinosa]

89 aa protein

accession:WP_080571544.1

Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Shewanella oneidensis]

278 aa protein

accession:WP_011071890.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Streptomyces]

271 aa protein

accession:WP_011029500.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Pseudomonas]

284 aa protein

accession:WP_003115566.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_011071890.1\|	AraC family transcriptional regulator [Shewanella oneidensis]	53.9	53.9	65%	8e-09	41.38%	WP_011071890.1
2 Select seq ref\|WP_003246321.1\|	AraC family transcriptional regulator [Bacillus]	50.8	50.8	58%	1e-07	44.23%	WP_003246321.1
3 Select seq ref\|WP_011029500.1\|	AraC family transcriptional regulator [Streptomyces]	50.4	50.4	59%	2e-07	39.62%	WP_011029500.1
4 Select seq ref\|WP_003115566.1\|	AraC family transcriptional regulator [Pseudomonas]	47.8	47.8	65%	1e-06	37.93%	WP_003115566.1
5 Select seq ref\|WP_194020559.1\|	helix-turn-helix domain-containing protein [Synechocystis salina]	43.1	43.1	55%	6e-05	40.00%	WP_194020559.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments