Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_094000461.1 type II secretion system secretin GspD [unclassified Stenotrophomonas] ... Query length: 733 aa

type II secretion system protein GspD ...

type II secretion system protein GspD [Deinococcus radiodurans]

422 aa protein

accession:WP_227086002.1

Alignment Sequence Identical proteins

type II secretion system secretin GspD ...

type II secretion system secretin GspD [Shewanella oneidensis]

704 aa protein

accession:WP_011070563.1

Alignment Sequence Identical proteins

type II secretion system secretin GspD ...

type II secretion system secretin GspD [Escherichia coli]

585 aa protein

accession:WP_001358887.1

Alignment Sequence Identical proteins

type II secretion system secretin GspD ...

type II secretion system secretin GspD [Pseudomonas]

776 aa protein

accession:WP_003106682.1

Alignment Sequence Identical proteins

Query: type II secretion system secretin GspD ...

type II secretion system secretin GspD [unclassified Stenotrophomonas]

733 aa protein

accession:WP_094000461.1

Sequence Identical proteins

type II secretion system protein GspD ...

type II secretion system protein GspD [Pseudomonas aeruginosa]

759 aa protein

accession:WP_010895558.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_010895558.1\|	type II secretion system protein GspD [Pseudomonas aeruginosa]	137	137	96%	3e-32	23.90%	WP_010895558.1
2 Select seq ref\|WP_011070563.1\|	type II secretion system secretin GspD [Shewanella oneidensis]	135	135	87%	2e-31	24.53%	WP_011070563.1
3 Select seq ref\|WP_001358887.1\|	type II secretion system secretin GspD [Escherichia coli]	127	127	72%	3e-29	24.13%	WP_001358887.1
4 Select seq ref\|WP_003106682.1\|	type II secretion system secretin GspD [Pseudomonas]	104	104	84%	1e-21	24.49%	WP_003106682.1
5 Select seq ref\|WP_227086002.1\|	type II secretion system protein GspD [Deinococcus radiodurans]	76.3	76.3	38%	3e-13	26.96%	WP_227086002.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments