Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_108176970.1 helix-turn-helix transcriptional regulator [Vibrio splendidus] ... Query length: 286 aa

PocR ligand-binding domain-containing protein ...

PocR ligand-binding domain-containing protein [Clostridioides difficile]

551 aa protein

accession:WP_011861418.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Pseudomonas]

301 aa protein

accession:WP_003089438.1

Alignment Sequence Identical proteins

Query: helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Vibrio splendidus]

286 aa protein

accession:WP_108176970.1

Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Pseudomonas aeruginosa]

224 aa protein

accession:WP_003082563.1

Alignment Sequence Identical proteins

GlxA family transcriptional regulator ...

GlxA family transcriptional regulator [Shewanella oneidensis]

330 aa protein

accession:WP_011074187.1

Alignment Sequence Identical proteins

DNA-binding transcriptional regulator YqhC ...

DNA-binding transcriptional regulator YqhC [Escherichia coli]

318 aa protein

accession:WP_001322279.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_003089438.1\|	AraC family transcriptional regulator [Pseudomonas]	117	117	87%	1e-29	27.27%	WP_003089438.1
2 Select seq ref\|WP_003082563.1\|	AraC family transcriptional regulator [Pseudomonas aeruginosa]	58.2	58.2	34%	1e-08	30.30%	WP_003082563.1
3 Select seq ref\|WP_011861418.1\|	PocR ligand-binding domain-containing protein [Clostridioides difficile]	55.5	55.5	35%	3e-07	23.76%	WP_011861418.1
4 Select seq ref\|WP_011074187.1\|	GlxA family transcriptional regulator [Shewanella oneidensis]	53.1	53.1	31%	1e-06	31.87%	WP_011074187.1
5 Select seq ref\|WP_001322279.1\|	DNA-binding transcriptional regulator YqhC [Escherichia coli]	48.5	48.5	34%	4e-05	32.00%	WP_001322279.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments