Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_117681973.1
efflux RND transporter permease subunit [Phocaeicola dorei]
...
Query length:
1026 aa
DOMAINS: and other(s) domains
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Query: efflux RND transporter permease subunit
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efflux RND transporter permease subunit [Phocaeicola dorei]
1026 aa protein
accession:WP_117681973.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Clostridioides difficile]
1044 aa protein
accession:WP_011861545.1
efflux RND transporter permease subunit
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efflux RND transporter permease subunit [Thermotoga maritima]
1000 aa protein
accession:WP_004083186.1
multidrug efflux RND transporter permease subunit MdtC
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multidrug efflux RND transporter permease subunit MdtC [Escherichia coli]
1025 aa protein
accession:WP_000667528.1
multidrug efflux RND transporter permease subunit MexN
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multidrug efflux RND transporter permease subunit MexN [Pseudomonas]
1036 aa protein
accession:WP_003147398.1
multidrug efflux RND transporter permease subunit
...
multidrug efflux RND transporter permease subunit [Shewanella oneidensis]
1046 aa protein
accession:WP_011073327.1
DOMAINS: and other(s) domains
...
efflux RND transporter permease subunit [Phocaeicola dorei]
1026 aa protein
accession:WP_117681973.1
efflux RND transporter permease subunit [Clostridioides difficile]
1044 aa protein
accession:WP_011861545.1
efflux RND transporter permease subunit [Thermotoga maritima]
1000 aa protein
accession:WP_004083186.1
multidrug efflux RND transporter permease subunit MdtC [Escherichia coli]
1025 aa protein
accession:WP_000667528.1
multidrug efflux RND transporter permease subunit MexN [Pseudomonas]
1036 aa protein
accession:WP_003147398.1
multidrug efflux RND transporter permease subunit [Shewanella oneidensis]
1046 aa protein
accession:WP_011073327.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 326 | 326 | 99% | 3e-94 | 25.60% | WP_011861545.1 | |
| 2 | 306 | 306 | 98% | 3e-87 | 26.08% | WP_004083186.1 | |
| 3 | 274 | 274 | 98% | 6e-76 | 24.71% | WP_000667528.1 | |
| 4 | 266 | 266 | 96% | 4e-73 | 24.78% | WP_003147398.1 | |
| 5 | 258 | 320 | 98% | 2e-70 | 24.50% | WP_011073327.1 |