Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_125836176.1
helix-turn-helix domain-containing protein [Pseudomonas sp. o96-267]
...
Query length:
257 aa
DOMAINS: and other(s) domains
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DNA-binding transcriptional regulator NimR
...
DNA-binding transcriptional regulator NimR [Escherichia coli]
272 aa protein
accession:WP_001417554.1
helix-turn-helix domain-containing protein
...
helix-turn-helix domain-containing protein [Pseudomonas aeruginosa]
254 aa protein
accession:WP_003113299.1
helix-turn-helix domain-containing protein
...
helix-turn-helix domain-containing protein [Shewanella oneidensis]
255 aa protein
accession:WP_011073329.1
Query: helix-turn-helix domain-containing protein
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helix-turn-helix domain-containing protein [Pseudomonas sp. o96-267]
257 aa protein
accession:WP_125836176.1
helix-turn-helix transcriptional regulator
...
helix-turn-helix transcriptional regulator [Pseudomonas]
260 aa protein
accession:WP_003082522.1
helix-turn-helix domain-containing protein
...
helix-turn-helix domain-containing protein [Streptomyces]
259 aa protein
accession:WP_011031705.1
DOMAINS: and other(s) domains
...
DNA-binding transcriptional regulator NimR [Escherichia coli]
272 aa protein
accession:WP_001417554.1
helix-turn-helix domain-containing protein [Pseudomonas aeruginosa]
254 aa protein
accession:WP_003113299.1
helix-turn-helix domain-containing protein [Shewanella oneidensis]
255 aa protein
accession:WP_011073329.1
helix-turn-helix domain-containing protein [Pseudomonas sp. o96-267]
257 aa protein
accession:WP_125836176.1
helix-turn-helix transcriptional regulator [Pseudomonas]
260 aa protein
accession:WP_003082522.1
helix-turn-helix domain-containing protein [Streptomyces]
259 aa protein
accession:WP_011031705.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 214 | 214 | 92% | 4e-68 | 45.19% | WP_003082522.1 | |
| 2 | 156 | 156 | 96% | 3e-45 | 35.89% | WP_011031705.1 | |
| 3 | 140 | 140 | 85% | 4e-39 | 34.68% | WP_003113299.1 | |
| 4 | 136 | 136 | 86% | 2e-37 | 34.68% | WP_001417554.1 | |
| 5 | 132 | 132 | 86% | 6e-36 | 33.63% | WP_011073329.1 |