Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_130055493.1 collagen-like protein [Bacillus] ... Query length: 835 aa

collagen-like exosporium glycoprotein BclA1 ...

collagen-like exosporium glycoprotein BclA1 [Clostridioides difficile]

681 aa protein

accession:WP_021368890.1

Alignment Sequence Identical proteins

Query: collagen-like protein ...

collagen-like protein [Bacillus]

835 aa protein

accession:WP_130055493.1

Sequence Identical proteins

collagen alpha-1(XXVII) chain B precursor ...

collagen alpha-1(XXVII) chain B precursor [Danio rerio]

1658 aa protein

accession:NP_001074044.1

Alignment Sequence Identical proteins

collagen alpha-1(XXVII) chain isoform X3 ...

collagen alpha-1(XXVII) chain isoform X3 [Mus musculus]

1828 aa protein

accession:XP_036020100.1

Alignment Sequence Identical proteins

collagen alpha-6(IV) chain isoform X4 ...

collagen alpha-6(IV) chain isoform X4 [Homo sapiens]

1667 aa protein

accession:XP_047297769.1

Alignment Sequence Identical proteins

collagen alpha-1(XXIV) chain isoform X1 ...

collagen alpha-1(XXIV) chain isoform X1 [Rattus norvegicus]

1731 aa protein

accession:XP_063138993.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001074044.1\|	collagen alpha-1(XXVII) chain B precursor [Danio rerio]	269	1215	94%	1e-74	35.66%	NP_001074044.1
2 Select seq ref\|XP_063138993.1\|	collagen alpha-1(XXIV) chain isoform X1 [Rattus norvegicus]	236	1072	81%	1e-63	40.61%	XP_063138993.1
3 Select seq ref\|WP_021368890.1\|	collagen-like exosporium glycoprotein BclA1 [Clostridioides difficile]	197	715	89%	2e-52	50.39%	WP_021368890.1
4 Select seq ref\|XP_036020100.1\|	collagen alpha-1(XXVII) chain isoform X3 [Mus musculus]	196	796	78%	1e-50	33.84%	XP_036020100.1
5 Select seq ref\|XP_047297769.1\|	collagen alpha-6(IV) chain isoform X4 [Homo sapiens]	191	1163	82%	3e-49	31.26%	XP_047297769.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments