Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_177142535.1
sigma-54 interaction domain-containing protein [Variovorax sp. YR216]
...
Query length:
509 aa
DOMAINS: and other(s) domains
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sigma-54 dependent transcriptional regulator PrdR
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sigma-54 dependent transcriptional regulator PrdR [Clostridioides difficile]
586 aa protein
accession:WP_003428097.1
sigma 54-interacting transcriptional regulator
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sigma 54-interacting transcriptional regulator [Clostridia]
601 aa protein
accession:WP_009898314.1
sigma-54-dependent response regulator transcription factor ZraR
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sigma-54-dependent response regulator transcription factor ZraR [Escherichia coli]
441 aa protein
accession:WP_000148545.1
nitrogen regulation protein NR(I)
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nitrogen regulation protein NR(I) [Enterobacteriaceae]
469 aa protein
accession:WP_001188777.1
Query: sigma-54 interaction domain-containing protein
...
sigma-54 interaction domain-containing protein [Variovorax sp. YR216]
509 aa protein
accession:WP_177142535.1
sigma-54-dependent transcriptional regulator HbcR
...
sigma-54-dependent transcriptional regulator HbcR [Pseudomonas]
481 aa protein
accession:WP_003113503.1
DOMAINS: and other(s) domains
...
sigma-54 dependent transcriptional regulator PrdR [Clostridioides difficile]
586 aa protein
accession:WP_003428097.1
sigma 54-interacting transcriptional regulator [Clostridia]
601 aa protein
accession:WP_009898314.1
sigma-54-dependent response regulator transcription factor ZraR [Escherichia coli]
441 aa protein
accession:WP_000148545.1
nitrogen regulation protein NR(I) [Enterobacteriaceae]
469 aa protein
accession:WP_001188777.1
sigma-54 interaction domain-containing protein [Variovorax sp. YR216]
509 aa protein
accession:WP_177142535.1
sigma-54-dependent transcriptional regulator HbcR [Pseudomonas]
481 aa protein
accession:WP_003113503.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 398 | 398 | 95% | 3e-133 | 47.12% | WP_003113503.1 | |
| 2 | 261 | 261 | 64% | 9e-79 | 39.33% | WP_003428097.1 | |
| 3 | 245 | 245 | 62% | 2e-74 | 44.69% | WP_000148545.1 | |
| 4 | 248 | 248 | 63% | 7e-74 | 41.07% | WP_009898314.1 | |
| 5 | 228 | 228 | 63% | 8e-68 | 43.33% | WP_001188777.1 |