Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_188874064.1 sigma-54 interaction domain-containing protein [Iodidimonas muriae] ... Query length: 479 aa

DNA-binding transcriptional regulator HyfR ...

DNA-binding transcriptional regulator HyfR [Escherichia coli]

670 aa protein

accession:WP_001251535.1

Alignment Sequence Identical proteins

two-component system response regulator CbrB ...

two-component system response regulator CbrB [Pseudomonas aeruginosa]

478 aa protein

accession:WP_003113914.1

Alignment Sequence Identical proteins

nitrogen regulation protein NR(I) ...

nitrogen regulation protein NR(I) [Enterobacteriaceae]

469 aa protein

accession:WP_001188777.1

Alignment Sequence Identical proteins

nitrogen regulation protein NR(I) ...

nitrogen regulation protein NR(I) [Shewanella oneidensis]

471 aa protein

accession:WP_011074101.1

Alignment Sequence Identical proteins

Query: sigma-54 interaction domain-containing protein ...

sigma-54 interaction domain-containing protein [Iodidimonas muriae]

479 aa protein

accession:WP_188874064.1

Sequence Identical proteins

sigma-54 dependent transcriptional regulator ...

sigma-54 dependent transcriptional regulator [Pseudomonas]

442 aa protein

accession:WP_003113486.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_003113486.1\|	sigma-54 dependent transcriptional regulator [Pseudomonas]	275	275	72%	2e-86	43.87%	WP_003113486.1
2 Select seq ref\|WP_001188777.1\|	nitrogen regulation protein NR(I) [Enterobacteriaceae]	250	250	71%	2e-76	39.46%	WP_001188777.1
3 Select seq ref\|WP_011074101.1\|	nitrogen regulation protein NR(I) [Shewanella oneidensis]	246	246	68%	5e-75	40.00%	WP_011074101.1
4 Select seq ref\|WP_001251535.1\|	DNA-binding transcriptional regulator HyfR [Escherichia coli]	234	234	61%	2e-68	43.55%	WP_001251535.1
5 Select seq ref\|WP_003113914.1\|	two-component system response regulator CbrB [Pseudomonas aeruginosa]	228	228	50%	1e-67	47.74%	WP_003113914.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments