Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_227497736.1
WD40/YVTN/BNR-like repeat-containing protein [Marinobacter]
...
Query length:
382 aa
DOMAINS: and other(s) domains
...
photosystem II stability/assembly factor HCF136, chloroplastic
...
photosystem II stability/assembly factor HCF136, chloroplastic [Glycine max]
393 aa protein
accession:XP_003540641.1
photosystem II stability/assembly factor, chloroplast (HCF136)
...
photosystem II stability/assembly factor, chloroplast (HCF136) [Arabidopsis thaliana]
403 aa protein
accession:NP_197703.1
photosynthesis system II assembly factor Ycf48
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photosynthesis system II assembly factor Ycf48 [Synechocystis]
342 aa protein
accession:WP_190598671.1
Query: WD40/YVTN/BNR-like repeat-containing protein
...
WD40/YVTN/BNR-like repeat-containing protein [Marinobacter]
382 aa protein
accession:WP_227497736.1
WD40/YVTN/BNR-like repeat-containing protein
...
WD40/YVTN/BNR-like repeat-containing protein [Pseudomonas]
365 aa protein
accession:WP_004350939.1
WD40/YVTN/BNR-like repeat-containing protein
...
WD40/YVTN/BNR-like repeat-containing protein [Shewanella oneidensis]
336 aa protein
accession:WP_011072545.1
DOMAINS: and other(s) domains
...
photosystem II stability/assembly factor HCF136, chloroplastic [Glycine max]
393 aa protein
accession:XP_003540641.1
photosystem II stability/assembly factor, chloroplast (HCF136) [Arabidopsis thaliana]
403 aa protein
accession:NP_197703.1
photosynthesis system II assembly factor Ycf48 [Synechocystis]
342 aa protein
accession:WP_190598671.1
WD40/YVTN/BNR-like repeat-containing protein [Marinobacter]
382 aa protein
accession:WP_227497736.1
WD40/YVTN/BNR-like repeat-containing protein [Pseudomonas]
365 aa protein
accession:WP_004350939.1
WD40/YVTN/BNR-like repeat-containing protein [Shewanella oneidensis]
336 aa protein
accession:WP_011072545.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 236 | 236 | 94% | 1e-73 | 37.98% | WP_004350939.1 | |
| 2 | 122 | 122 | 85% | 3e-30 | 29.10% | WP_011072545.1 | |
| 3 | 49.3 | 92.8 | 71% | 5e-05 | 31.37% | XP_003540641.1 | |
| 4 | 48.1 | 48.1 | 75% | 1e-04 | 24.04% | NP_197703.1 | |
| 5 | 45.4 | 45.4 | 62% | 7e-04 | 23.90% | WP_190598671.1 |