Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_235422599.1 helix-turn-helix domain-containing protein [Collinsella tanakaei] ... Query length: 193 aa

cytoskeleton protein RodZ ...

cytoskeleton protein RodZ [Escherichia coli]

337 aa protein

accession:WP_001090860.1

Alignment Sequence Identical proteins

helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Streptococcus pneumoniae]

64 aa protein

accession:WP_001082474.1

Alignment Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Streptomyces]

71 aa protein

accession:WP_011030337.1

Alignment Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Clostridioides difficile]

364 aa protein

accession:WP_003435932.1

Alignment Sequence Identical proteins

Query: helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Collinsella tanakaei]

193 aa protein

accession:WP_235422599.1

Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Clostridioides difficile]

169 aa protein

accession:WP_021373503.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_021373503.1\|	helix-turn-helix domain-containing protein [Clostridioides difficile]	53.5	53.5	32%	8e-08	40.32%	WP_021373503.1
2 Select seq ref\|WP_011030337.1\|	helix-turn-helix domain-containing protein [Streptomyces]	38.5	38.5	29%	0.004	33.93%	WP_011030337.1
3 Select seq ref\|WP_001082474.1\|	helix-turn-helix transcriptional regulator [Streptococcus pneumoniae]	37.7	37.7	29%	0.007	35.09%	WP_001082474.1
4 Select seq ref\|WP_001090860.1\|	cytoskeleton protein RodZ [Escherichia coli]	37.0	37.0	30%	0.10	36.21%	WP_001090860.1
5 Select seq ref\|WP_003435932.1\|	helix-turn-helix domain-containing protein [Clostridioides difficile]	46.2	46.2	30%	9e-05	35.00%	WP_003435932.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments