Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_236609966.1
sigma-54 interaction domain-containing protein [Desulfotignum]
...
Query length:
490 aa
DOMAINS: and other(s) domains
...
transcriptional regulator DdaR
...
transcriptional regulator DdaR [Pseudomonas]
466 aa protein
accession:WP_003112458.1
sigma-54-dependent response regulator transcription factor ZraR
...
sigma-54-dependent response regulator transcription factor ZraR [Escherichia coli]
441 aa protein
accession:WP_000148545.1
two-component system response regulator CbrB
...
two-component system response regulator CbrB [Pseudomonas aeruginosa]
478 aa protein
accession:WP_003113914.1
Query: sigma-54 interaction domain-containing protein
...
sigma-54 interaction domain-containing protein [Desulfotignum]
490 aa protein
accession:WP_236609966.1
arginine utilization regulatory protein RocR
...
arginine utilization regulatory protein RocR [Bacillaceae]
461 aa protein
accession:WP_003244510.1
sigma-54 interaction domain-containing protein
...
sigma-54 interaction domain-containing protein [Clostridioides difficile]
466 aa protein
accession:WP_022621033.1
DOMAINS: and other(s) domains
...
transcriptional regulator DdaR [Pseudomonas]
466 aa protein
accession:WP_003112458.1
sigma-54-dependent response regulator transcription factor ZraR [Escherichia coli]
441 aa protein
accession:WP_000148545.1
two-component system response regulator CbrB [Pseudomonas aeruginosa]
478 aa protein
accession:WP_003113914.1
sigma-54 interaction domain-containing protein [Desulfotignum]
490 aa protein
accession:WP_236609966.1
arginine utilization regulatory protein RocR [Bacillaceae]
461 aa protein
accession:WP_003244510.1
sigma-54 interaction domain-containing protein [Clostridioides difficile]
466 aa protein
accession:WP_022621033.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 349 | 349 | 95% | 8e-115 | 41.03% | WP_003244510.1 | |
| 2 | 285 | 285 | 94% | 1e-89 | 36.81% | WP_022621033.1 | |
| 3 | 233 | 233 | 92% | 7e-70 | 33.33% | WP_003112458.1 | |
| 4 | 221 | 221 | 66% | 1e-65 | 38.46% | WP_000148545.1 | |
| 5 | 221 | 221 | 46% | 6e-65 | 48.47% | WP_003113914.1 |