Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_245237731.1 AraC family transcriptional regulator [Paenibacillus ihuae] ... Query length: 51 aa

PocR ligand-binding domain-containing protein ...

PocR ligand-binding domain-containing protein [Clostridioides difficile]

551 aa protein

accession:WP_011861418.1

Alignment Sequence Identical proteins

arabinose operon transcriptional regulator AraC ...

arabinose operon transcriptional regulator AraC [Bacteria]

292 aa protein

accession:WP_001300811.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Bacillus subtilis]

287 aa protein

accession:WP_009966961.1

Alignment Sequence Identical proteins

Query: AraC family transcriptional regulator ...

AraC family transcriptional regulator [Paenibacillus ihuae]

51 aa protein

accession:WP_245237731.1

Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Bacillus]

772 aa protein

accession:WP_009968004.1

Alignment Sequence Identical proteins

transcriptional regulator MdrR1 ...

transcriptional regulator MdrR1 [Pseudomonas aeruginosa]

293 aa protein

accession:WP_010895665.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_011861418.1\|	PocR ligand-binding domain-containing protein [Clostridioides difficile]	45.4	45.4	76%	1e-06	43.59%	WP_011861418.1
2 Select seq ref\|WP_009968004.1\|	helix-turn-helix domain-containing protein [Bacillus]	41.2	41.2	70%	3e-05	44.44%	WP_009968004.1
3 Select seq ref\|WP_009966961.1\|	AraC family transcriptional regulator [Bacillus subtilis]	39.3	39.3	64%	2e-04	48.48%	WP_009966961.1
4 Select seq ref\|WP_010895665.1\|	transcriptional regulator MdrR1 [Pseudomonas aeruginosa]	37.7	37.7	68%	5e-04	48.57%	WP_010895665.1
5 Select seq ref\|WP_001300811.1\|	arabinose operon transcriptional regulator AraC [Bacteria]	37.4	37.4	68%	7e-04	45.71%	WP_001300811.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments