Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_248443882.1
efflux RND transporter permease subunit [unclassified Pseudoalteromonas]
...
Query length:
1050 aa
DOMAINS: and other(s) domains
...
multidrug efflux RND transporter permease AcrD
...
multidrug efflux RND transporter permease AcrD [Escherichia coli]
1037 aa protein
accession:WP_001263104.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Synechocystis salina]
1061 aa protein
accession:WP_194019941.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Microcystis aeruginosa]
1100 aa protein
accession:WP_061432939.1
Query: efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [unclassified Pseudoalteromonas]
1050 aa protein
accession:WP_248443882.1
multidrug efflux RND transporter permease subunit MexF
...
multidrug efflux RND transporter permease subunit MexF [Pseudomonas]
1062 aa protein
accession:WP_003089834.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Shewanella oneidensis]
1047 aa protein
accession:WP_011073333.1
DOMAINS: and other(s) domains
...
multidrug efflux RND transporter permease AcrD [Escherichia coli]
1037 aa protein
accession:WP_001263104.1
efflux RND transporter permease subunit [Synechocystis salina]
1061 aa protein
accession:WP_194019941.1
efflux RND transporter permease subunit [Microcystis aeruginosa]
1100 aa protein
accession:WP_061432939.1
efflux RND transporter permease subunit [unclassified Pseudoalteromonas]
1050 aa protein
accession:WP_248443882.1
multidrug efflux RND transporter permease subunit MexF [Pseudomonas]
1062 aa protein
accession:WP_003089834.1
efflux RND transporter permease subunit [Shewanella oneidensis]
1047 aa protein
accession:WP_011073333.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1394 | 1394 | 100% | 0.0 | 67.74% | WP_003089834.1 | |
| 2 | 1366 | 1366 | 99% | 0.0 | 66.70% | WP_011073333.1 | |
| 3 | 802 | 802 | 98% | 0.0 | 42.24% | WP_194019941.1 | |
| 4 | 772 | 772 | 98% | 0.0 | 39.23% | WP_001263104.1 | |
| 5 | 754 | 754 | 100% | 0.0 | 39.79% | WP_061432939.1 |