Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_292888488.1
sigma-54 factor interaction domain-containing protein [Nisaea sp.]
...
Query length:
213 aa
DOMAINS: and other(s) domains
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sigma-54 interaction domain-containing protein
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sigma-54 interaction domain-containing protein [Escherichia coli]
592 aa protein
accession:WP_000417831.1
Query: sigma-54 factor interaction domain-containing protein
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sigma-54 factor interaction domain-containing protein [Nisaea sp.]
213 aa protein
accession:WP_292888488.1
sigma-54 interaction domain-containing protein
...
sigma-54 interaction domain-containing protein [Pseudomonas]
503 aa protein
accession:WP_003114610.1
nitrogen regulation protein NR(I)
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nitrogen regulation protein NR(I) [Enterobacteriaceae]
469 aa protein
accession:WP_001188777.1
two-component system response regulator CbrB
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two-component system response regulator CbrB [Pseudomonas aeruginosa]
478 aa protein
accession:WP_003113914.1
sigma-54 dependent transcriptional regulator
...
sigma-54 dependent transcriptional regulator [Shewanella oneidensis]
477 aa protein
accession:WP_011073116.1
DOMAINS: and other(s) domains
...
sigma-54 interaction domain-containing protein [Escherichia coli]
592 aa protein
accession:WP_000417831.1
sigma-54 factor interaction domain-containing protein [Nisaea sp.]
213 aa protein
accession:WP_292888488.1
sigma-54 interaction domain-containing protein [Pseudomonas]
503 aa protein
accession:WP_003114610.1
nitrogen regulation protein NR(I) [Enterobacteriaceae]
469 aa protein
accession:WP_001188777.1
two-component system response regulator CbrB [Pseudomonas aeruginosa]
478 aa protein
accession:WP_003113914.1
sigma-54 dependent transcriptional regulator [Shewanella oneidensis]
477 aa protein
accession:WP_011073116.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 229 | 229 | 83% | 1e-71 | 61.24% | WP_003114610.1 | |
| 2 | 228 | 228 | 86% | 2e-71 | 57.07% | WP_001188777.1 | |
| 3 | 227 | 227 | 84% | 5e-71 | 58.10% | WP_003113914.1 | |
| 4 | 218 | 218 | 85% | 9e-67 | 56.28% | WP_000417831.1 | |
| 5 | 211 | 211 | 92% | 4e-65 | 51.53% | WP_011073116.1 |