Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_311432214.1 helix-turn-helix transcriptional regulator [Facklamia hominis] ... Query length: 344 aa

helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Clostridioides difficile]

404 aa protein

accession:WP_003436565.1

Alignment Sequence Identical proteins

helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Pseudomonas]

68 aa protein

accession:WP_003093358.1

Alignment Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Escherichia coli]

133 aa protein

accession:WP_000986592.1

Alignment Sequence Identical proteins

HTH cro/C1-type domain-containing protein ...

HTH cro/C1-type domain-containing protein [Caenorhabditis elegans]

156 aa protein

accession:NP_502166.1

Alignment Sequence Identical proteins

Query: helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Facklamia hominis]

344 aa protein

accession:WP_311432214.1

Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Bacillaceae]

108 aa protein

accession:WP_009967517.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_009967517.1\|	helix-turn-helix domain-containing protein [Bacillaceae]	57.8	57.8	21%	4e-09	37.84%	WP_009967517.1
2 Select seq ref\|WP_003436565.1\|	helix-turn-helix transcriptional regulator [Clostridioides difficile]	60.1	60.1	15%	1e-08	54.72%	WP_003436565.1
3 Select seq ref\|WP_003093358.1\|	helix-turn-helix transcriptional regulator [Pseudomonas]	45.4	45.4	16%	3e-05	36.84%	WP_003093358.1
4 Select seq ref\|NP_502166.1\|	HTH cro/C1-type domain-containing protein [Caenorhabditis elegans]	39.7	39.7	16%	0.015	32.14%	NP_502166.1
5 Select seq ref\|WP_000986592.1\|	helix-turn-helix domain-containing protein [Escherichia coli]	39.3	39.3	14%	0.017	36.00%	WP_000986592.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments