Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_394337702.1
transcription initiation factor IIB family protein [Halobellus sp. Atlit-38R]
...
Query length:
291 aa
DOMAINS: and other(s) domains
...
transcription factor IIIB 50 kDa subunit isoform X1
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transcription factor IIIB 50 kDa subunit isoform X1 [Danio rerio]
423 aa protein
accession:XP_009303924.1
Cyclin/Brf1-like TBP-binding protein
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Cyclin/Brf1-like TBP-binding protein [Arabidopsis thaliana]
557 aa protein
accession:NP_001324771.1
transcription factor TFIIB
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transcription factor TFIIB [Saccharomyces cerevisiae S288C]
345 aa protein
accession:NP_015411.1
transcription initiation factor IIB
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transcription initiation factor IIB [Methanothermobacter thermautotrophicus]
310 aa protein
accession:WP_010876518.1
Query: transcription initiation factor IIB family protein
...
transcription initiation factor IIB family protein [Halobellus sp. Atlit-38R]
291 aa protein
accession:WP_394337702.1
transcription initiation factor IIB
...
transcription initiation factor IIB [Sulfolobus acidocaldarius]
307 aa protein
accession:WP_024083452.1
DOMAINS: and other(s) domains
...
transcription factor IIIB 50 kDa subunit isoform X1 [Danio rerio]
423 aa protein
accession:XP_009303924.1
Cyclin/Brf1-like TBP-binding protein [Arabidopsis thaliana]
557 aa protein
accession:NP_001324771.1
transcription factor TFIIB [Saccharomyces cerevisiae S288C]
345 aa protein
accession:NP_015411.1
transcription initiation factor IIB [Methanothermobacter thermautotrophicus]
310 aa protein
accession:WP_010876518.1
transcription initiation factor IIB family protein [Halobellus sp. Atlit-38R]
291 aa protein
accession:WP_394337702.1
transcription initiation factor IIB [Sulfolobus acidocaldarius]
307 aa protein
accession:WP_024083452.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 356 | 356 | 95% | 4e-123 | 60.43% | WP_010876518.1 | |
| 2 | 257 | 257 | 95% | 3e-84 | 48.75% | WP_024083452.1 | |
| 3 | 108 | 108 | 94% | 2e-26 | 26.39% | NP_015411.1 | |
| 4 | 78.2 | 78.2 | 62% | 4e-15 | 29.90% | NP_001324771.1 | |
| 5 | 50.4 | 50.4 | 51% | 5e-06 | 21.82% | XP_009303924.1 |