Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_394358782.1
efflux RND transporter permease subunit [Hydrogenimonas thermophila]
...
Query length:
541 aa
DOMAINS: and other(s) domains
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multidrug efflux RND transporter permease subunit MexK
...
multidrug efflux RND transporter permease subunit MexK [Pseudomonas]
1025 aa protein
accession:WP_003092464.1
surfactin resistance protein SrfP
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surfactin resistance protein SrfP [Bacillus]
1052 aa protein
accession:WP_003242663.1
multidrug efflux RND transporter permease subunit MtrD
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multidrug efflux RND transporter permease subunit MtrD [Neisseria meningitidis]
1067 aa protein
accession:WP_082308689.1
efflux RND transporter permease AcrB
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efflux RND transporter permease AcrB [Escherichia coli]
1049 aa protein
accession:WP_001132452.1
Query: efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Hydrogenimonas thermophila]
541 aa protein
accession:WP_394358782.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Shewanella oneidensis]
1087 aa protein
accession:WP_011072999.1
DOMAINS: and other(s) domains
...
multidrug efflux RND transporter permease subunit MexK [Pseudomonas]
1025 aa protein
accession:WP_003092464.1
surfactin resistance protein SrfP [Bacillus]
1052 aa protein
accession:WP_003242663.1
multidrug efflux RND transporter permease subunit MtrD [Neisseria meningitidis]
1067 aa protein
accession:WP_082308689.1
efflux RND transporter permease AcrB [Escherichia coli]
1049 aa protein
accession:WP_001132452.1
efflux RND transporter permease subunit [Hydrogenimonas thermophila]
541 aa protein
accession:WP_394358782.1
efflux RND transporter permease subunit [Shewanella oneidensis]
1087 aa protein
accession:WP_011072999.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 224 | 224 | 96% | 2e-62 | 31.63% | WP_011072999.1 | |
| 2 | 114 | 114 | 97% | 1e-25 | 24.44% | WP_003092464.1 | |
| 3 | 83.2 | 83.2 | 95% | 1e-15 | 23.33% | WP_003242663.1 | |
| 4 | 65.5 | 65.5 | 99% | 5e-10 | 22.06% | WP_082308689.1 | |
| 5 | 61.6 | 61.6 | 92% | 7e-09 | 21.12% | WP_001132452.1 |