Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_402278825.1
zinc ribbon domain-containing protein YjdM [unclassified Herbaspirillum]
...
Query length:
113 aa
DOMAINS: and other(s) domains
...
zinc ribbon domain-containing protein YjdM
...
zinc ribbon domain-containing protein YjdM [Clostridioides difficile]
114 aa protein
accession:WP_003435770.1
zinc ribbon domain-containing protein YjdM
...
zinc ribbon domain-containing protein YjdM [Enterobacteriaceae]
111 aa protein
accession:WP_001300891.1
zinc ribbon domain-containing protein YjdM
...
zinc ribbon domain-containing protein YjdM [Neisseria meningitidis]
109 aa protein
accession:WP_002216158.1
zinc ribbon domain-containing protein YjdM
...
zinc ribbon domain-containing protein YjdM [Streptococcus pneumoniae]
112 aa protein
accession:WP_001061586.1
Query: zinc ribbon domain-containing protein YjdM
...
zinc ribbon domain-containing protein YjdM [unclassified Herbaspirillum]
113 aa protein
accession:WP_402278825.1
zinc ribbon domain-containing protein YjdM
...
zinc ribbon domain-containing protein YjdM [Pseudomonas]
113 aa protein
accession:WP_003101229.1
DOMAINS: and other(s) domains
...
zinc ribbon domain-containing protein YjdM [Clostridioides difficile]
114 aa protein
accession:WP_003435770.1
zinc ribbon domain-containing protein YjdM [Enterobacteriaceae]
111 aa protein
accession:WP_001300891.1
zinc ribbon domain-containing protein YjdM [Neisseria meningitidis]
109 aa protein
accession:WP_002216158.1
zinc ribbon domain-containing protein YjdM [Streptococcus pneumoniae]
112 aa protein
accession:WP_001061586.1
zinc ribbon domain-containing protein YjdM [unclassified Herbaspirillum]
113 aa protein
accession:WP_402278825.1
zinc ribbon domain-containing protein YjdM [Pseudomonas]
113 aa protein
accession:WP_003101229.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 182 | 182 | 100% | 1e-59 | 75.22% | WP_003101229.1 | |
| 2 | 156 | 156 | 97% | 1e-49 | 65.77% | WP_001300891.1 | |
| 3 | 153 | 153 | 100% | 2e-48 | 66.67% | WP_001061586.1 | |
| 4 | 144 | 144 | 99% | 7e-45 | 59.13% | WP_003435770.1 | |
| 5 | 144 | 144 | 98% | 8e-45 | 63.96% | WP_002216158.1 |