Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WXU52611.1 mGFP-T2A_Halo_HAPLN1Z307-313A [Vector pAAV_pCAG_mGFP_2A_Halo_HAPLN1Z307-313A] ... Query length: 968 aa

haloalkane dehalogenase ...

haloalkane dehalogenase [Mycobacterium]

300 aa protein

accession:WP_003413363.1

Alignment Sequence Identical proteins

Query: mGFP-T2A_Halo_HAPLN1Z307-313A ...

mGFP-T2A_Halo_HAPLN1Z307-313A [Vector pAAV_pCAG_mGFP_2A_Halo_HAPLN1Z307-313A]

968 aa protein

accession:WXU52611.1

Sequence Identical proteins

hyaluronan and proteoglycan link protein 1 precursor ...

hyaluronan and proteoglycan link protein 1 precursor [Mus musculus]

356 aa protein

accession:NP_038528.3

Alignment Sequence Identical proteins

hyaluronan and proteoglycan link protein 1 precursor ...

hyaluronan and proteoglycan link protein 1 precursor [Homo sapiens]

354 aa protein

accession:NP_001875.1

Alignment Sequence Identical proteins

hyaluronan and proteoglycan link protein 1 ...

hyaluronan and proteoglycan link protein 1 [Danio rerio]

353 aa protein

accession:XP_002663704.3

Alignment Sequence Identical proteins

hyaluronan and proteoglycan link protein 1 isoform X1 ...

hyaluronan and proteoglycan link protein 1 isoform X1 [Mus musculus]

355 aa protein

accession:XP_006517138.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_038528.3\|	hyaluronan and proteoglycan link protein 1 precursor [Mus musculus]	704	704	35%	0.0	98.25%	NP_038528.3
2 Select seq ref\|NP_001875.1\|	hyaluronan and proteoglycan link protein 1 precursor [Homo sapiens]	672	672	35%	0.0	94.99%	NP_001875.1
3 Select seq ref\|XP_002663704.3\|	hyaluronan and proteoglycan link protein 1 [Danio rerio]	533	533	35%	0.0	73.45%	XP_002663704.3
4 Select seq ref\|WP_003413363.1\|	haloalkane dehalogenase [Mycobacterium]	241	241	29%	6e-71	45.67%	WP_003413363.1
5 Select seq ref\|XP_006517138.1\|	hyaluronan and proteoglycan link protein 1 isoform X1 [Mus musculus]	697	697	35%	0.0	97.95%	XP_006517138.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments