Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XDU51020.1 Niemann Pick type C1 [Pipistrellus coromandra] ... Query length: 249 aa

sphingolipid transporter ...

sphingolipid transporter [Saccharomyces cerevisiae S288C]

1170 aa protein

accession:NP_015319.1

Alignment Sequence Identical proteins

NPC intracellular cholesterol transporter 1 isoform X3 ...

NPC intracellular cholesterol transporter 1 isoform X3 [Glycine max]

1284 aa protein

accession:XP_040865074.1

Alignment Sequence Identical proteins

Niemann-Pick type C-1a, isoform E ...

Niemann-Pick type C-1a, isoform E [Drosophila melanogaster]

1283 aa protein

accession:NP_001285795.1

Alignment Sequence Identical proteins

NPC1-like intracellular cholesterol transporter 1 ...

NPC1-like intracellular cholesterol transporter 1 [Danio rerio]

1411 aa protein

accession:XP_021334155.1

Alignment Sequence Identical proteins

Query: Niemann Pick type C1 ...

Niemann Pick type C1 [Pipistrellus coromandra]

249 aa protein

accession:XDU51020.1

Sequence Identical proteins

NPC intracellular cholesterol transporter 1 isoform X9 ...

NPC intracellular cholesterol transporter 1 isoform X9 [Homo sapiens]

1256 aa protein

accession:XP_047293495.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_047293495.1\|	NPC intracellular cholesterol transporter 1 isoform X9 [Homo sapiens]	470	470	100%	4e-157	88.76%	XP_047293495.1
2 Select seq ref\|XP_021334155.1\|	NPC1-like intracellular cholesterol transporter 1 [Danio rerio]	195	195	100%	7e-56	40.08%	XP_021334155.1
3 Select seq ref\|NP_001285795.1\|	Niemann-Pick type C-1a, isoform E [Drosophila melanogaster]	164	164	100%	3e-45	38.89%	NP_001285795.1
4 Select seq ref\|XP_040865074.1\|	NPC intracellular cholesterol transporter 1 isoform X3 [Glycine max]	134	134	100%	8e-35	34.12%	XP_040865074.1
5 Select seq ref\|NP_015319.1\|	sphingolipid transporter [Saccharomyces cerevisiae S288C]	83.2	83.2	100%	3e-17	29.88%	NP_015319.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments