Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_001837037.1
pre-mRNA branch site protein p14 [Coprinopsis cinerea okayama7#130]
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Query length:
122 aa
DOMAINS: and other(s) domains
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RNA-binding ribosome biosynthesis protein MRD1
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RNA-binding ribosome biosynthesis protein MRD1 [Saccharomyces cerevisiae S288C]
887 aa protein
accession:NP_015437.1
U2 small nuclear ribonucleoprotein B
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U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
241 aa protein
accession:XP_636725.1
RNA-binding protein 39 isoform X2
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RNA-binding protein 39 isoform X2 [Homo sapiens]
404 aa protein
accession:XP_047296558.1
Query: pre-mRNA branch site protein p14
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pre-mRNA branch site protein p14 [Coprinopsis cinerea okayama7#130]
122 aa protein
accession:XP_001837037.1
splicing factor 3B subunit 6, putative
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splicing factor 3B subunit 6, putative [Plasmodium falciparum 3D7]
106 aa protein
accession:XP_001350646.1
Pre-mRNA branch site p14-like protein
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Pre-mRNA branch site p14-like protein [Schizosaccharomyces pombe]
114 aa protein
accession:NP_595835.2
DOMAINS: and other(s) domains
...
RNA-binding ribosome biosynthesis protein MRD1 [Saccharomyces cerevisiae S288C]
887 aa protein
accession:NP_015437.1
U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
241 aa protein
accession:XP_636725.1
RNA-binding protein 39 isoform X2 [Homo sapiens]
404 aa protein
accession:XP_047296558.1
pre-mRNA branch site protein p14 [Coprinopsis cinerea okayama7#130]
122 aa protein
accession:XP_001837037.1
splicing factor 3B subunit 6, putative [Plasmodium falciparum 3D7]
106 aa protein
accession:XP_001350646.1
Pre-mRNA branch site p14-like protein [Schizosaccharomyces pombe]
114 aa protein
accession:NP_595835.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 117 | 117 | 74% | 1e-34 | 57.14% | XP_001350646.1 | |
| 2 | 111 | 111 | 93% | 6e-32 | 45.61% | NP_595835.2 | |
| 3 | 59.3 | 59.3 | 75% | 9e-11 | 35.42% | XP_636725.1 | |
| 4 | 53.5 | 53.5 | 75% | 2e-08 | 36.46% | XP_047296558.1 | |
| 5 | 53.5 | 53.5 | 85% | 2e-08 | 31.62% | NP_015437.1 |