Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_002261893.1
TFIIH basal transcription factor complex helicase XPB subunit, putative [Plasmodium knowlesi strain H]
...
Query length:
888 aa
DOMAINS: and other(s) domains
...
transcription factor IIH subunit
...
transcription factor IIH subunit [Dictyostelium discoideum AX4]
800 aa protein
accession:XP_647819.1
general transcription and DNA repair factor IIH helicase/translocase subunit XPB
...
general transcription and DNA repair factor IIH helicase/translocase subunit XPB [Mus musculus]
783 aa protein
accession:NP_598419.1
general transcription and DNA repair factor IIH helicase/translocase subunit XPB
...
general transcription and DNA repair factor IIH helicase/translocase subunit XPB [Rattus norvegicus]
782 aa protein
accession:NP_001026814.1
general transcription and DNA repair factor IIH helicase/translocase subunit XPB
...
general transcription and DNA repair factor IIH helicase/translocase subunit XPB [Danio rerio]
782 aa protein
accession:NP_963876.1
Query: TFIIH basal transcription factor complex helicase XPB subunit, putative
...
TFIIH basal transcription factor complex helicase XPB subunit, putative [Plasmodium knowlesi strain H]
888 aa protein
accession:XP_002261893.1
TFIIH basal transcription factor complex helicase XPB subunit, putative
...
TFIIH basal transcription factor complex helicase XPB subunit, putative [Plasmodium falciparum 3D7]
886 aa protein
accession:XP_001347653.1
DOMAINS: and other(s) domains
...
transcription factor IIH subunit [Dictyostelium discoideum AX4]
800 aa protein
accession:XP_647819.1
general transcription and DNA repair factor IIH helicase/translocase subunit XPB [Mus musculus]
783 aa protein
accession:NP_598419.1
general transcription and DNA repair factor IIH helicase/translocase subunit XPB [Rattus norvegicus]
782 aa protein
accession:NP_001026814.1
general transcription and DNA repair factor IIH helicase/translocase subunit XPB [Danio rerio]
782 aa protein
accession:NP_963876.1
TFIIH basal transcription factor complex helicase XPB subunit, putative [Plasmodium knowlesi strain H]
888 aa protein
accession:XP_002261893.1
TFIIH basal transcription factor complex helicase XPB subunit, putative [Plasmodium falciparum 3D7]
886 aa protein
accession:XP_001347653.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1486 | 1486 | 100% | 0.0 | 84.88% | XP_001347653.1 | |
| 2 | 653 | 653 | 91% | 0.0 | 44.01% | XP_647819.1 | |
| 3 | 613 | 613 | 90% | 0.0 | 41.34% | NP_598419.1 | |
| 4 | 610 | 610 | 90% | 0.0 | 40.84% | NP_001026814.1 | |
| 5 | 597 | 597 | 86% | 0.0 | 41.38% | NP_963876.1 |