Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_002262163.1 uncharacterized protein PKNH_1427900 [Plasmodium knowlesi strain H] ... Query length: 228 aa

U1 small nuclear ribonucleoprotein C ...

U1 small nuclear ribonucleoprotein C [Homo sapiens]

159 aa protein

accession:NP_003084.1

Alignment Sequence Identical proteins

U1 small nuclear ribonucleoprotein C isoform 1 ...

U1 small nuclear ribonucleoprotein C isoform 1 [Mus musculus]

159 aa protein

accession:NP_035562.1

Alignment Sequence Identical proteins

U1 small nuclear ribonucleoprotein C ...

U1 small nuclear ribonucleoprotein C [Danio rerio]

159 aa protein

accession:NP_775358.1

Alignment Sequence Identical proteins

small ribonucleoprotein particle U1 subunit C ...

small ribonucleoprotein particle U1 subunit C [Drosophila melanogaster]

145 aa protein

accession:NP_650767.1

Alignment Sequence Identical proteins

Query: uncharacterized protein PKNH_1427900 ...

uncharacterized protein PKNH_1427900 [Plasmodium knowlesi strain H]

228 aa protein

accession:XP_002262163.1

Sequence Identical proteins

U1 small nuclear ribonucleoprotein C, putative ...

U1 small nuclear ribonucleoprotein C, putative [Plasmodium falciparum 3D7]

235 aa protein

accession:XP_001349398.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_001349398.1\|	U1 small nuclear ribonucleoprotein C, putative [Plasmodium falciparum 3D7]	154	154	56%	3e-45	65.15%	XP_001349398.1
2 Select seq ref\|NP_003084.1\|	U1 small nuclear ribonucleoprotein C [Homo sapiens]	58.9	58.9	20%	1e-09	50.00%	NP_003084.1
3 Select seq ref\|NP_035562.1\|	U1 small nuclear ribonucleoprotein C isoform 1 [Mus musculus]	58.5	58.5	20%	1e-09	50.00%	NP_035562.1
4 Select seq ref\|NP_775358.1\|	U1 small nuclear ribonucleoprotein C [Danio rerio]	58.5	58.5	20%	2e-09	50.00%	NP_775358.1
5 Select seq ref\|NP_650767.1\|	small ribonucleoprotein particle U1 subunit C [Drosophila melanogaster]	58.2	58.2	20%	2e-09	52.17%	NP_650767.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments