Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_002274860.1
serine/arginine-rich splicing factor SC35 [Vitis vinifera]
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Query length:
255 aa
DOMAINS: and other(s) domains
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RNA recognition motif (RRM)-containing protein
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RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana]
302 aa protein
accession:NP_001327717.1
transformer-2 protein homolog alpha isoform X1
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transformer-2 protein homolog alpha isoform X1 [Danio rerio]
296 aa protein
accession:XP_005170064.1
putative splicing factor, arginine/serine-rich 4
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putative splicing factor, arginine/serine-rich 4 [Caenorhabditis elegans]
196 aa protein
accession:NP_001379856.1
RNA-binding region RNP-1 domain-containing protein
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RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
306 aa protein
accession:XP_629578.1
Query: serine/arginine-rich splicing factor SC35
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serine/arginine-rich splicing factor SC35 [Vitis vinifera]
255 aa protein
accession:XP_002274860.1
serine/arginine-rich splicing factor SC35-like protein isoform X2
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serine/arginine-rich splicing factor SC35-like protein isoform X2 [Glycine max]
267 aa protein
accession:XP_040871159.1
DOMAINS: and other(s) domains
...
RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana]
302 aa protein
accession:NP_001327717.1
transformer-2 protein homolog alpha isoform X1 [Danio rerio]
296 aa protein
accession:XP_005170064.1
putative splicing factor, arginine/serine-rich 4 [Caenorhabditis elegans]
196 aa protein
accession:NP_001379856.1
RNA-binding region RNP-1 domain-containing protein [Dictyostelium discoideum AX4]
306 aa protein
accession:XP_629578.1
serine/arginine-rich splicing factor SC35 [Vitis vinifera]
255 aa protein
accession:XP_002274860.1
serine/arginine-rich splicing factor SC35-like protein isoform X2 [Glycine max]
267 aa protein
accession:XP_040871159.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 244 | 244 | 100% | 2e-80 | 69.74% | XP_040871159.1 | |
| 2 | 82.8 | 82.8 | 34% | 2e-18 | 44.94% | NP_001379856.1 | |
| 3 | 68.2 | 68.2 | 32% | 2e-12 | 44.58% | XP_629578.1 | |
| 4 | 66.2 | 66.2 | 29% | 1e-11 | 39.47% | XP_005170064.1 | |
| 5 | 65.5 | 65.5 | 31% | 2e-11 | 40.00% | NP_001327717.1 |