Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_002492363.1
RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III [Komagataella phaffii GS115]
...
Query length:
214 aa
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerases I, II, and III subunit RPABC1
...
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Danio rerio]
210 aa protein
accession:NP_001003564.1
DNA-directed RNA polymerases I, II, and III subunit RPABC1
...
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Rattus norvegicus]
210 aa protein
accession:NP_001103084.1
DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform a
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DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform a [Homo sapiens]
210 aa protein
accession:NP_002686.3
DNA-directed RNA polymerases I, II, and III subunit RPABC1
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DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Caenorhabditis elegans]
211 aa protein
accession:NP_491961.1
Query: RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III
...
RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III [Komagataella phaffii GS115]
214 aa protein
accession:XP_002492363.1
DNA-directed RNA polymerase core subunit RPB5
...
DNA-directed RNA polymerase core subunit RPB5 [Saccharomyces cerevisiae S288C]
215 aa protein
accession:NP_009712.1
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Danio rerio]
210 aa protein
accession:NP_001003564.1
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Rattus norvegicus]
210 aa protein
accession:NP_001103084.1
DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform a [Homo sapiens]
210 aa protein
accession:NP_002686.3
DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Caenorhabditis elegans]
211 aa protein
accession:NP_491961.1
RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III [Komagataella phaffii GS115]
214 aa protein
accession:XP_002492363.1
DNA-directed RNA polymerase core subunit RPB5 [Saccharomyces cerevisiae S288C]
215 aa protein
accession:NP_009712.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 347 | 347 | 99% | 1e-121 | 73.71% | NP_009712.1 | |
| 2 | 203 | 203 | 98% | 6e-65 | 47.20% | NP_001003564.1 | |
| 3 | 198 | 198 | 98% | 3e-63 | 44.39% | NP_001103084.1 | |
| 4 | 196 | 196 | 98% | 2e-62 | 44.39% | NP_002686.3 | |
| 5 | 195 | 195 | 100% | 6e-62 | 45.62% | NP_491961.1 |