Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_002492460.1
RNA polymerase II subunit B12.5 [Komagataella phaffii GS115]
...
Query length:
118 aa
DOMAINS: and other(s) domains
...
RNA polymerase II core subunit
...
RNA polymerase II core subunit [Dictyostelium discoideum AX4]
120 aa protein
accession:XP_642530.2
DNA-directed RNA polymerase II subunit RPB11-a
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DNA-directed RNA polymerase II subunit RPB11-a [Danio rerio]
117 aa protein
accession:NP_001019571.1
putative DNA-directed RNA polymerase II subunit RPB11
...
putative DNA-directed RNA polymerase II subunit RPB11 [Caenorhabditis elegans]
122 aa protein
accession:NP_496942.1
RNA polymerase II complex subunit Rpb11
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RNA polymerase II complex subunit Rpb11 [Schizosaccharomyces pombe]
123 aa protein
accession:NP_593333.1
Query: RNA polymerase II subunit B12.5
...
RNA polymerase II subunit B12.5 [Komagataella phaffii GS115]
118 aa protein
accession:XP_002492460.1
DNA-directed RNA polymerase II core subunit RPB11
...
DNA-directed RNA polymerase II core subunit RPB11 [Saccharomyces cerevisiae S288C]
120 aa protein
accession:NP_014638.1
DOMAINS: and other(s) domains
...
RNA polymerase II core subunit [Dictyostelium discoideum AX4]
120 aa protein
accession:XP_642530.2
DNA-directed RNA polymerase II subunit RPB11-a [Danio rerio]
117 aa protein
accession:NP_001019571.1
putative DNA-directed RNA polymerase II subunit RPB11 [Caenorhabditis elegans]
122 aa protein
accession:NP_496942.1
RNA polymerase II complex subunit Rpb11 [Schizosaccharomyces pombe]
123 aa protein
accession:NP_593333.1
RNA polymerase II subunit B12.5 [Komagataella phaffii GS115]
118 aa protein
accession:XP_002492460.1
DNA-directed RNA polymerase II core subunit RPB11 [Saccharomyces cerevisiae S288C]
120 aa protein
accession:NP_014638.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 140 | 140 | 100% | 2e-43 | 56.78% | NP_014638.1 | |
| 2 | 93.6 | 93.6 | 98% | 1e-24 | 42.24% | NP_593333.1 | |
| 3 | 91.7 | 91.7 | 91% | 8e-24 | 37.04% | XP_642530.2 | |
| 4 | 87.0 | 87.0 | 88% | 5e-22 | 40.95% | NP_001019571.1 | |
| 5 | 84.7 | 84.7 | 89% | 4e-21 | 41.51% | NP_496942.1 |