Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_002493766.1
RNA polymerase II third largest subunit B44, part of central core [Komagataella phaffii GS115]
...
Query length:
304 aa
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerases I and III subunit RPAC1, putative
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DNA-directed RNA polymerases I and III subunit RPAC1, putative [Plasmodium falciparum 3D7]
333 aa protein
accession:XP_001348113.1
RNA polymerase II core subunit
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RNA polymerase II core subunit [Dictyostelium discoideum AX4]
302 aa protein
accession:XP_629750.1
DNA-directed RNA polymerase II subunit RPB3
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DNA-directed RNA polymerase II subunit RPB3 [Danio rerio]
275 aa protein
accession:NP_001161428.1
DNA-directed RNA polymerase II complex subunit Rpb3
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DNA-directed RNA polymerase II complex subunit Rpb3 [Schizosaccharomyces pombe]
297 aa protein
accession:NP_588324.1
Query: RNA polymerase II third largest subunit B44, part of central core
...
RNA polymerase II third largest subunit B44, part of central core [Komagataella phaffii GS115]
304 aa protein
accession:XP_002493766.1
DNA-directed RNA polymerase II core subunit RPB3
...
DNA-directed RNA polymerase II core subunit RPB3 [Saccharomyces cerevisiae S288C]
318 aa protein
accession:NP_012243.3
DOMAINS: and other(s) domains
...
DNA-directed RNA polymerases I and III subunit RPAC1, putative [Plasmodium falciparum 3D7]
333 aa protein
accession:XP_001348113.1
RNA polymerase II core subunit [Dictyostelium discoideum AX4]
302 aa protein
accession:XP_629750.1
DNA-directed RNA polymerase II subunit RPB3 [Danio rerio]
275 aa protein
accession:NP_001161428.1
DNA-directed RNA polymerase II complex subunit Rpb3 [Schizosaccharomyces pombe]
297 aa protein
accession:NP_588324.1
RNA polymerase II third largest subunit B44, part of central core [Komagataella phaffii GS115]
304 aa protein
accession:XP_002493766.1
DNA-directed RNA polymerase II core subunit RPB3 [Saccharomyces cerevisiae S288C]
318 aa protein
accession:NP_012243.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 327 | 327 | 86% | 4e-111 | 58.94% | NP_012243.3 | |
| 2 | 301 | 301 | 89% | 2e-101 | 51.26% | NP_588324.1 | |
| 3 | 214 | 214 | 85% | 1e-67 | 43.45% | NP_001161428.1 | |
| 4 | 185 | 185 | 84% | 6e-56 | 37.15% | XP_629750.1 | |
| 5 | 115 | 115 | 82% | 4e-29 | 28.37% | XP_001348113.1 |