Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_002523214.2
protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Ricinus communis]
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Query length:
475 aa
DOMAINS: and other(s) domains
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protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
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protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Glycine max]
515 aa protein
accession:XP_003529054.1
protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
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protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Glycine max]
506 aa protein
accession:XP_003522124.1
Ubiquitin carboxyl-terminal hydrolase family protein
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Ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana]
494 aa protein
accession:NP_201104.1
Query: protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
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protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Ricinus communis]
475 aa protein
accession:XP_002523214.2
protein WHAT'S THIS FACTOR 1, chloroplastic
...
protein WHAT'S THIS FACTOR 1, chloroplastic [Glycine max]
459 aa protein
accession:XP_006592829.1
protein WHAT'S THIS FACTOR 1, chloroplastic
...
protein WHAT'S THIS FACTOR 1, chloroplastic [Glycine max]
498 aa protein
accession:XP_014621460.1
DOMAINS: and other(s) domains
...
protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Glycine max]
515 aa protein
accession:XP_003529054.1
protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Glycine max]
506 aa protein
accession:XP_003522124.1
Ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana]
494 aa protein
accession:NP_201104.1
protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Ricinus communis]
475 aa protein
accession:XP_002523214.2
protein WHAT'S THIS FACTOR 1, chloroplastic [Glycine max]
459 aa protein
accession:XP_006592829.1
protein WHAT'S THIS FACTOR 1, chloroplastic [Glycine max]
498 aa protein
accession:XP_014621460.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 533 | 533 | 88% | 0.0 | 66.13% | XP_006592829.1 | |
| 2 | 523 | 523 | 97% | 0.0 | 59.45% | NP_201104.1 | |
| 3 | 507 | 507 | 89% | 3e-176 | 63.53% | XP_014621460.1 | |
| 4 | 237 | 237 | 78% | 6e-71 | 36.60% | XP_003529054.1 | |
| 5 | 232 | 232 | 78% | 4e-69 | 37.24% | XP_003522124.1 |