Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_003002134.1
transcription initiation factor TFIID complex 60 kDa subunit [Verticillium alfalfae VaMs.102]
...
Query length:
398 aa
DOMAINS: and other(s) domains
...
TATA-binding protein-associated factor TAF6
...
TATA-binding protein-associated factor TAF6 [Saccharomyces cerevisiae S288C]
516 aa protein
accession:NP_011403.1
Query: transcription initiation factor TFIID complex 60 kDa subunit
...
transcription initiation factor TFIID complex 60 kDa subunit [Verticillium alfalfae VaMs.102]
398 aa protein
accession:XP_003002134.1
transcription initiation factor TFIID subunit 6
...
transcription initiation factor TFIID subunit 6 [Danio rerio]
636 aa protein
accession:NP_001004557.1
transcription initiation factor TFIID subunit 6
...
transcription initiation factor TFIID subunit 6 [Mus musculus]
678 aa protein
accession:NP_001343529.1
transcription initiation factor TFIID subunit 6 isoform epsilon
...
transcription initiation factor TFIID subunit 6 isoform epsilon [Homo sapiens]
714 aa protein
accession:NP_001177344.1
TATA BOX ASSOCIATED FACTOR II 59
...
TATA BOX ASSOCIATED FACTOR II 59 [Arabidopsis thaliana]
549 aa protein
accession:NP_001030969.1
DOMAINS: and other(s) domains
...
TATA-binding protein-associated factor TAF6 [Saccharomyces cerevisiae S288C]
516 aa protein
accession:NP_011403.1
transcription initiation factor TFIID complex 60 kDa subunit [Verticillium alfalfae VaMs.102]
398 aa protein
accession:XP_003002134.1
transcription initiation factor TFIID subunit 6 [Danio rerio]
636 aa protein
accession:NP_001004557.1
transcription initiation factor TFIID subunit 6 [Mus musculus]
678 aa protein
accession:NP_001343529.1
transcription initiation factor TFIID subunit 6 isoform epsilon [Homo sapiens]
714 aa protein
accession:NP_001177344.1
TATA BOX ASSOCIATED FACTOR II 59 [Arabidopsis thaliana]
549 aa protein
accession:NP_001030969.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 167 | 245 | 66% | 2e-45 | 48.12% | NP_011403.1 | |
| 2 | 144 | 144 | 38% | 1e-36 | 44.23% | NP_001004557.1 | |
| 3 | 135 | 199 | 64% | 2e-33 | 45.59% | NP_001343529.1 | |
| 4 | 135 | 199 | 64% | 2e-33 | 45.59% | NP_001177344.1 | |
| 5 | 130 | 213 | 61% | 4e-32 | 47.37% | NP_001030969.1 |