Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_003029309.1
uncharacterized protein SCHCODRAFT_058593 [Schizophyllum commune H4-8]
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Query length:
645 aa
DOMAINS: and other(s) domains
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CCR4-NOT core exoribonuclease subunit CCR4
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CCR4-NOT core exoribonuclease subunit CCR4 [Saccharomyces cerevisiae S288C]
837 aa protein
accession:NP_009381.1
CCR4-NOT transcription complex subunit 6-like isoform 1
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CCR4-NOT transcription complex subunit 6-like isoform 1 [Rattus norvegicus]
550 aa protein
accession:NP_001101825.1
CCR4-NOT transcription complex subunit 6-like isoform 2
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CCR4-NOT transcription complex subunit 6-like isoform 2 [Mus musculus]
555 aa protein
accession:NP_849185.2
CCR4-NOT transcription complex, subunit 6b
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CCR4-NOT transcription complex, subunit 6b [Danio rerio]
558 aa protein
accession:NP_001103498.1
Query: uncharacterized protein SCHCODRAFT_058593
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uncharacterized protein SCHCODRAFT_058593 [Schizophyllum commune H4-8]
645 aa protein
accession:XP_003029309.1
CCR4-Not complex subunit Ccr4
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CCR4-Not complex subunit Ccr4 [Schizosaccharomyces pombe]
690 aa protein
accession:NP_587901.1
DOMAINS: and other(s) domains
...
CCR4-NOT core exoribonuclease subunit CCR4 [Saccharomyces cerevisiae S288C]
837 aa protein
accession:NP_009381.1
CCR4-NOT transcription complex subunit 6-like isoform 1 [Rattus norvegicus]
550 aa protein
accession:NP_001101825.1
CCR4-NOT transcription complex subunit 6-like isoform 2 [Mus musculus]
555 aa protein
accession:NP_849185.2
CCR4-NOT transcription complex, subunit 6b [Danio rerio]
558 aa protein
accession:NP_001103498.1
uncharacterized protein SCHCODRAFT_058593 [Schizophyllum commune H4-8]
645 aa protein
accession:XP_003029309.1
CCR4-Not complex subunit Ccr4 [Schizosaccharomyces pombe]
690 aa protein
accession:NP_587901.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 515 | 515 | 98% | 4e-174 | 40.12% | NP_587901.1 | |
| 2 | 389 | 389 | 78% | 2e-123 | 38.42% | NP_009381.1 | |
| 3 | 371 | 371 | 78% | 4e-120 | 39.78% | NP_001101825.1 | |
| 4 | 371 | 371 | 78% | 5e-120 | 39.78% | NP_849185.2 | |
| 5 | 368 | 368 | 77% | 1e-118 | 39.25% | NP_001103498.1 |