Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_003328680.1 U1 small nuclear ribonucleoprotein C [Puccinia graminis f. sp. tritici CRL 75-36-700-3] ... Query length: 188 aa

Query: U1 small nuclear ribonucleoprotein C ...

U1 small nuclear ribonucleoprotein C [Puccinia graminis f. sp. tritici CRL 75-36-700-3]

188 aa protein

accession:XP_003328680.1

Sequence Identical proteins

U1 small nuclear ribonucleoprotein C ...

U1 small nuclear ribonucleoprotein C [Danio rerio]

159 aa protein

accession:NP_775358.1

Alignment Sequence Identical proteins

U1 small nuclear ribonucleoprotein C ...

U1 small nuclear ribonucleoprotein C [Homo sapiens]

159 aa protein

accession:NP_003084.1

Alignment Sequence Identical proteins

U1 small nuclear ribonucleoprotein C ...

U1 small nuclear ribonucleoprotein C [Rattus norvegicus]

159 aa protein

accession:NP_001257969.1

Alignment Sequence Identical proteins

U1 small nuclear ribonucleoprotein C isoform 2 ...

U1 small nuclear ribonucleoprotein C isoform 2 [Mus musculus]

182 aa protein

accession:NP_001400503.1

Alignment Sequence Identical proteins

U1 small nuclear ribonucleoprotein C ...

U1 small nuclear ribonucleoprotein C [Caenorhabditis elegans]

142 aa protein

accession:NP_001370586.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_775358.1\|	U1 small nuclear ribonucleoprotein C [Danio rerio]	80.5	80.5	31%	5e-18	55.00%	NP_775358.1
2 Select seq ref\|NP_001370586.1\|	U1 small nuclear ribonucleoprotein C [Caenorhabditis elegans]	79.7	79.7	31%	7e-18	55.93%	NP_001370586.1
3 Select seq ref\|NP_003084.1\|	U1 small nuclear ribonucleoprotein C [Homo sapiens]	79.0	79.0	31%	2e-17	55.00%	NP_003084.1
4 Select seq ref\|NP_001257969.1\|	U1 small nuclear ribonucleoprotein C [Rattus norvegicus]	79.0	79.0	31%	2e-17	55.00%	NP_001257969.1
5 Select seq ref\|NP_001400503.1\|	U1 small nuclear ribonucleoprotein C isoform 2 [Mus musculus]	77.8	77.8	30%	8e-17	54.39%	NP_001400503.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments