Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_004144200.1
DNA polymerase epsilon subunit C [Cucumis sativus]
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Query length:
139 aa
DOMAINS: and other(s) domains
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nuclear transcription factor Y subunit gamma isoform 9
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nuclear transcription factor Y subunit gamma isoform 9 [Mus musculus]
282 aa protein
accession:NP_001408220.1
nuclear transcription factor Y subunit gamma isoform X4
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nuclear transcription factor Y subunit gamma isoform X4 [Danio rerio]
335 aa protein
accession:XP_009292657.1
Query: DNA polymerase epsilon subunit C
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DNA polymerase epsilon subunit C [Cucumis sativus]
139 aa protein
accession:XP_004144200.1
class 2 transcription repressor NC2 alpha 6 isoform X1
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class 2 transcription repressor NC2 alpha 6 isoform X1 [Glycine max]
332 aa protein
accession:XP_040865393.1
hypothetical protein DDB_G0292510
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hypothetical protein DDB_G0292510 [Dictyostelium discoideum AX4]
550 aa protein
accession:XP_629595.1
negative cofactor 2 transcription regulator complex subunit BUR6
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negative cofactor 2 transcription regulator complex subunit BUR6 [Saccharomyces cerevisiae S288C]
142 aa protein
accession:NP_011086.3
DOMAINS: and other(s) domains
...
nuclear transcription factor Y subunit gamma isoform 9 [Mus musculus]
282 aa protein
accession:NP_001408220.1
nuclear transcription factor Y subunit gamma isoform X4 [Danio rerio]
335 aa protein
accession:XP_009292657.1
DNA polymerase epsilon subunit C [Cucumis sativus]
139 aa protein
accession:XP_004144200.1
class 2 transcription repressor NC2 alpha 6 isoform X1 [Glycine max]
332 aa protein
accession:XP_040865393.1
hypothetical protein DDB_G0292510 [Dictyostelium discoideum AX4]
550 aa protein
accession:XP_629595.1
negative cofactor 2 transcription regulator complex subunit BUR6 [Saccharomyces cerevisiae S288C]
142 aa protein
accession:NP_011086.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 56.6 | 56.6 | 53% | 2e-09 | 38.67% | XP_040865393.1 | |
| 2 | 55.8 | 55.8 | 56% | 4e-09 | 35.44% | NP_001408220.1 | |
| 3 | 55.8 | 55.8 | 56% | 5e-09 | 35.44% | XP_009292657.1 | |
| 4 | 53.1 | 53.1 | 56% | 4e-08 | 34.15% | XP_629595.1 | |
| 5 | 48.5 | 48.5 | 58% | 5e-07 | 34.57% | NP_011086.3 |