Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_004374154.1 charged multivesicular body protein 6 [Trichechus manatus latirostris] ... Query length: 201 aa

Charged multivesicular body protein 6 ...

Charged multivesicular body protein 6 [Caenorhabditis elegans]

208 aa protein

accession:NP_490762.1

Alignment Sequence Identical proteins

vacuolar protein sorting 20, isoform C ...

vacuolar protein sorting 20, isoform C [Drosophila melanogaster]

212 aa protein

accession:NP_611686.2

Alignment Sequence Identical proteins

charged multivesicular body protein 6 ...

charged multivesicular body protein 6 [Danio rerio]

206 aa protein

accession:NP_001003874.1

Alignment Sequence Identical proteins

Query: charged multivesicular body protein 6 ...

charged multivesicular body protein 6 [Trichechus manatus latirostris]

201 aa protein

accession:XP_004374154.1

Sequence Identical proteins

charged multivesicular body protein 6 ...

charged multivesicular body protein 6 [Homo sapiens]

201 aa protein

accession:NP_078867.2

Alignment Sequence Identical proteins

charged multivesicular body protein 6 ...

charged multivesicular body protein 6 [Mus musculus]

200 aa protein

accession:NP_001078967.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_078867.2\|	charged multivesicular body protein 6 [Homo sapiens]	365	365	100%	2e-129	90.05%	NP_078867.2
2 Select seq ref\|NP_001078967.1\|	charged multivesicular body protein 6 [Mus musculus]	356	356	100%	7e-126	90.05%	NP_001078967.1
3 Select seq ref\|NP_001003874.1\|	charged multivesicular body protein 6 [Danio rerio]	254	254	96%	9e-86	69.23%	NP_001003874.1
4 Select seq ref\|NP_611686.2\|	vacuolar protein sorting 20, isoform C [Drosophila melanogaster]	179	179	99%	4e-56	48.13%	NP_611686.2
5 Select seq ref\|NP_490762.1\|	Charged multivesicular body protein 6 [Caenorhabditis elegans]	169	169	96%	4e-52	45.50%	NP_490762.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments