Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_004418999.1
PREDICTED: DNA-directed RNA polymerase I subunit RPA43 [Ceratotherium simum simum]
...
Query length:
337 aa
DOMAINS: and other(s) domains
...
RNA polymerase I subunit F
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RNA polymerase I subunit F [Drosophila melanogaster]
253 aa protein
accession:NP_609081.1
DNA-directed RNA polymerase I complex subunit Rpa43
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DNA-directed RNA polymerase I complex subunit Rpa43 [Schizosaccharomyces pombe]
173 aa protein
accession:NP_596665.1
DNA-directed RNA polymerase I subunit RPA43
...
DNA-directed RNA polymerase I subunit RPA43 [Danio rerio]
390 aa protein
accession:NP_001007154.1
DNA-directed RNA polymerase I subunit RPA43
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DNA-directed RNA polymerase I subunit RPA43 [Mus musculus]
330 aa protein
accession:NP_758457.1
Query: PREDICTED: DNA-directed RNA polymerase I subunit RPA43
...
PREDICTED: DNA-directed RNA polymerase I subunit RPA43 [Ceratotherium simum simum]
337 aa protein
accession:XP_004418999.1
DNA-directed RNA polymerase I subunit RPA43
...
DNA-directed RNA polymerase I subunit RPA43 [Homo sapiens]
338 aa protein
accession:NP_001002926.1
DOMAINS: and other(s) domains
...
RNA polymerase I subunit F [Drosophila melanogaster]
253 aa protein
accession:NP_609081.1
DNA-directed RNA polymerase I complex subunit Rpa43 [Schizosaccharomyces pombe]
173 aa protein
accession:NP_596665.1
DNA-directed RNA polymerase I subunit RPA43 [Danio rerio]
390 aa protein
accession:NP_001007154.1
DNA-directed RNA polymerase I subunit RPA43 [Mus musculus]
330 aa protein
accession:NP_758457.1
PREDICTED: DNA-directed RNA polymerase I subunit RPA43 [Ceratotherium simum simum]
337 aa protein
accession:XP_004418999.1
DNA-directed RNA polymerase I subunit RPA43 [Homo sapiens]
338 aa protein
accession:NP_001002926.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 532 | 532 | 99% | 0.0 | 85.46% | NP_001002926.1 | |
| 2 | 447 | 447 | 99% | 2e-157 | 77.15% | NP_758457.1 | |
| 3 | 253 | 253 | 64% | 1e-80 | 55.50% | NP_001007154.1 | |
| 4 | 72.0 | 72.0 | 42% | 1e-13 | 28.93% | NP_596665.1 | |
| 5 | 64.7 | 64.7 | 77% | 1e-10 | 24.71% | NP_609081.1 |