Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_004988054.1 uncharacterized protein PTSG_13144 [Salpingoeca rosetta] ... Query length: 947 aa

Rqc2p ...

Rqc2p [Saccharomyces cerevisiae S288C]

1038 aa protein

accession:NP_015316.1

Alignment Sequence Identical proteins

ribosome quality control complex subunit Rqc2 ...

ribosome quality control complex subunit Rqc2 [Schizosaccharomyces pombe]

1021 aa protein

accession:NP_588145.2

Alignment Sequence Identical proteins

ribosome quality control complex subunit NEMF isoform X1 ...

ribosome quality control complex subunit NEMF isoform X1 [Homo sapiens]

993 aa protein

accession:XP_047287867.1

Alignment Sequence Identical proteins

conserved protein, unknown function ...

conserved protein, unknown function [Plasmodium falciparum 3D7]

2180 aa protein

accession:XP_024329146.1

Alignment Sequence Identical proteins

Query: uncharacterized protein PTSG_13144 ...

uncharacterized protein PTSG_13144 [Salpingoeca rosetta]

947 aa protein

accession:XP_004988054.1

Sequence Identical proteins

ribosome rescue protein RqcH ...

ribosome rescue protein RqcH [Methanothermobacter]

652 aa protein

accession:WP_048061171.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_047287867.1\|	ribosome quality control complex subunit NEMF isoform X1 [Homo sapiens]	389	389	51%	8e-119	39.22%	XP_047287867.1
2 Select seq ref\|NP_588145.2\|	ribosome quality control complex subunit Rqc2 [Schizosaccharomyces pombe]	269	269	51%	5e-75	35.66%	NP_588145.2
3 Select seq ref\|XP_024329146.1\|	conserved protein, unknown function [Plasmodium falciparum 3D7]	201	269	53%	9e-52	32.21%	XP_024329146.1
4 Select seq ref\|NP_015316.1\|	Rqc2p [Saccharomyces cerevisiae S288C]	164	164	43%	1e-40	27.61%	NP_015316.1
5 Select seq ref\|WP_048061171.1\|	ribosome rescue protein RqcH [Methanothermobacter]	157	157	40%	4e-39	29.97%	WP_048061171.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments