Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_005168941.1
U5 small nuclear ribonucleoprotein TSSC4 isoform X1 [Danio rerio]
...
Query length:
306 aa
DOMAINS: and other(s) domains
...
uncharacterized protein Dmel_CG6674, isoform A
...
uncharacterized protein Dmel_CG6674, isoform A [Drosophila melanogaster]
233 aa protein
accession:NP_648377.1
U5 small nuclear ribonucleoprotein TSSC4 isoform b
...
U5 small nuclear ribonucleoprotein TSSC4 isoform b [Homo sapiens]
265 aa protein
accession:NP_001284590.1
U5 small nuclear ribonucleoprotein TSSC4 isoform a
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U5 small nuclear ribonucleoprotein TSSC4 isoform a [Homo sapiens]
329 aa protein
accession:NP_001284587.1
U5 small nuclear ribonucleoprotein TSSC4 isoform 1
...
U5 small nuclear ribonucleoprotein TSSC4 isoform 1 [Mus musculus]
317 aa protein
accession:NP_001108557.1
Query: U5 small nuclear ribonucleoprotein TSSC4 isoform X1
...
U5 small nuclear ribonucleoprotein TSSC4 isoform X1 [Danio rerio]
306 aa protein
accession:XP_005168941.1
U5 small nuclear ribonucleoprotein TSSC4
...
U5 small nuclear ribonucleoprotein TSSC4 [Danio rerio]
306 aa protein
accession:NP_001039313.1
DOMAINS: and other(s) domains
...
uncharacterized protein Dmel_CG6674, isoform A [Drosophila melanogaster]
233 aa protein
accession:NP_648377.1
U5 small nuclear ribonucleoprotein TSSC4 isoform b [Homo sapiens]
265 aa protein
accession:NP_001284590.1
U5 small nuclear ribonucleoprotein TSSC4 isoform a [Homo sapiens]
329 aa protein
accession:NP_001284587.1
U5 small nuclear ribonucleoprotein TSSC4 isoform 1 [Mus musculus]
317 aa protein
accession:NP_001108557.1
U5 small nuclear ribonucleoprotein TSSC4 isoform X1 [Danio rerio]
306 aa protein
accession:XP_005168941.1
U5 small nuclear ribonucleoprotein TSSC4 [Danio rerio]
306 aa protein
accession:NP_001039313.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 618 | 618 | 100% | 0.0 | 99.02% | NP_001039313.1 | |
| 2 | 94.0 | 94.0 | 53% | 4e-21 | 37.43% | NP_001284590.1 | |
| 3 | 91.3 | 91.3 | 75% | 1e-19 | 31.76% | NP_001108557.1 | |
| 4 | 40.0 | 40.0 | 14% | 0.016 | 40.00% | NP_648377.1 | |
| 5 | 94.0 | 94.0 | 53% | 1e-20 | 37.43% | NP_001284587.1 |