Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_005908738.2 PREDICTED: proteasome subunit beta type-1 [Bos mutus] ... Query length: 348 aa

proteasome subunit beta type-1, putative ...

proteasome subunit beta type-1, putative [Plasmodium falciparum 3D7]

240 aa protein

accession:XP_002808699.1

Alignment Sequence Identical proteins

proteasome subunit beta type 1 ...

proteasome subunit beta type 1 [Dictyostelium discoideum AX4]

236 aa protein

accession:XP_001134620.1

Alignment Sequence Identical proteins

20S proteasome complex subunit beta 6 Pam1 ...

20S proteasome complex subunit beta 6 Pam1 [Schizosaccharomyces pombe]

225 aa protein

accession:NP_594729.1

Alignment Sequence Identical proteins

proteasome core particle subunit beta 6 ...

proteasome core particle subunit beta 6 [Saccharomyces cerevisiae S288C]

241 aa protein

accession:NP_009512.1

Alignment Sequence Identical proteins

Query: PREDICTED: proteasome subunit beta type-1 ...

PREDICTED: proteasome subunit beta type-1 [Bos mutus]

348 aa protein

accession:XP_005908738.2

Sequence Identical proteins

proteasome subunit beta type-1 isoform X1 ...

proteasome subunit beta type-1 isoform X1 [Rattus norvegicus]

240 aa protein

accession:XP_063132072.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_063132072.1\|	proteasome subunit beta type-1 isoform X1 [Rattus norvegicus]	465	465	68%	2e-166	92.08%	XP_063132072.1
2 Select seq ref\|NP_594729.1\|	20S proteasome complex subunit beta 6 Pam1 [Schizosaccharomyces pombe]	217	217	61%	9e-69	45.37%	NP_594729.1
3 Select seq ref\|NP_009512.1\|	proteasome core particle subunit beta 6 [Saccharomyces cerevisiae S288C]	209	209	62%	3e-65	44.35%	NP_009512.1
4 Select seq ref\|XP_001134620.1\|	proteasome subunit beta type 1 [Dictyostelium discoideum AX4]	192	192	61%	4e-59	42.33%	XP_001134620.1
5 Select seq ref\|XP_002808699.1\|	proteasome subunit beta type-1, putative [Plasmodium falciparum 3D7]	187	187	61%	4e-57	42.72%	XP_002808699.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments