Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006006857.1
protein phosphatase 1 regulatory subunit 42 [Latimeria chalumnae]
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Query length:
365 aa
DOMAINS: and other(s) domains
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centrosomal protein of 97 kDa isoform X1
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centrosomal protein of 97 kDa isoform X1 [Homo sapiens]
749 aa protein
accession:XP_047304873.1
U2A'/phosphoprotein 32 family A C-terminal domain-containing protein
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U2A'/phosphoprotein 32 family A C-terminal domain-containing protein [Caenorhabditis elegans]
1150 aa protein
accession:NP_001343670.1
type 1 protein phosphatase-activating protein SDS22
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type 1 protein phosphatase-activating protein SDS22 [Saccharomyces cerevisiae S288C]
338 aa protein
accession:NP_012728.1
protein phosphatase 1 regulatory subunit 42 isoform X1
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protein phosphatase 1 regulatory subunit 42 isoform X1 [Rattus norvegicus]
269 aa protein
accession:XP_063144489.1
Query: protein phosphatase 1 regulatory subunit 42
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protein phosphatase 1 regulatory subunit 42 [Latimeria chalumnae]
365 aa protein
accession:XP_006006857.1
protein phosphatase 1 regulatory subunit 42 isoform X1
...
protein phosphatase 1 regulatory subunit 42 isoform X1 [Danio rerio]
329 aa protein
accession:XP_017209310.1
DOMAINS: and other(s) domains
...
centrosomal protein of 97 kDa isoform X1 [Homo sapiens]
749 aa protein
accession:XP_047304873.1
U2A'/phosphoprotein 32 family A C-terminal domain-containing protein [Caenorhabditis elegans]
1150 aa protein
accession:NP_001343670.1
type 1 protein phosphatase-activating protein SDS22 [Saccharomyces cerevisiae S288C]
338 aa protein
accession:NP_012728.1
protein phosphatase 1 regulatory subunit 42 isoform X1 [Rattus norvegicus]
269 aa protein
accession:XP_063144489.1
protein phosphatase 1 regulatory subunit 42 [Latimeria chalumnae]
365 aa protein
accession:XP_006006857.1
protein phosphatase 1 regulatory subunit 42 isoform X1 [Danio rerio]
329 aa protein
accession:XP_017209310.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 319 | 319 | 81% | 5e-107 | 56.23% | XP_017209310.1 | |
| 2 | 309 | 309 | 71% | 6e-104 | 63.08% | XP_063144489.1 | |
| 3 | 63.2 | 63.2 | 52% | 4e-10 | 29.74% | NP_012728.1 | |
| 4 | 41.6 | 41.6 | 23% | 0.006 | 32.61% | XP_047304873.1 | |
| 5 | 39.3 | 39.3 | 23% | 0.037 | 27.38% | NP_001343670.1 |