Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006113850.1
U5 small nuclear ribonucleoprotein 200 kDa helicase [Pelodiscus sinensis]
...
Query length:
2127 aa
DOMAINS: and other(s) domains
...
ATP-dependent RNA helicase BRR2
...
ATP-dependent RNA helicase BRR2 [Saccharomyces cerevisiae S288C]
2163 aa protein
accession:NP_011099.1
activating signal cointegrator 1 complex subunit 3 isoform X1
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activating signal cointegrator 1 complex subunit 3 isoform X1 [Rattus norvegicus]
2201 aa protein
accession:XP_063135250.1
ATP-dependent RNA helicase
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ATP-dependent RNA helicase [Schizosaccharomyces pombe]
1935 aa protein
accession:NP_596560.1
U5 small nuclear ribonucleoprotein 200 kDa helicase
...
U5 small nuclear ribonucleoprotein 200 kDa helicase [Caenorhabditis elegans]
2145 aa protein
accession:NP_001366952.1
Query: U5 small nuclear ribonucleoprotein 200 kDa helicase
...
U5 small nuclear ribonucleoprotein 200 kDa helicase [Pelodiscus sinensis]
2127 aa protein
accession:XP_006113850.1
U5 small nuclear ribonucleoprotein 200 kDa helicase
...
U5 small nuclear ribonucleoprotein 200 kDa helicase [Danio rerio]
2134 aa protein
accession:NP_001116729.1
DOMAINS: and other(s) domains
...
ATP-dependent RNA helicase BRR2 [Saccharomyces cerevisiae S288C]
2163 aa protein
accession:NP_011099.1
activating signal cointegrator 1 complex subunit 3 isoform X1 [Rattus norvegicus]
2201 aa protein
accession:XP_063135250.1
ATP-dependent RNA helicase [Schizosaccharomyces pombe]
1935 aa protein
accession:NP_596560.1
U5 small nuclear ribonucleoprotein 200 kDa helicase [Caenorhabditis elegans]
2145 aa protein
accession:NP_001366952.1
U5 small nuclear ribonucleoprotein 200 kDa helicase [Pelodiscus sinensis]
2127 aa protein
accession:XP_006113850.1
U5 small nuclear ribonucleoprotein 200 kDa helicase [Danio rerio]
2134 aa protein
accession:NP_001116729.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 3937 | 3937 | 100% | 0.0 | 89.42% | NP_001116729.1 | |
| 2 | 2721 | 2721 | 99% | 0.0 | 60.38% | NP_001366952.1 | |
| 3 | 1565 | 1565 | 86% | 0.0 | 42.29% | XP_063135250.1 | |
| 4 | 1508 | 1508 | 99% | 0.0 | 39.22% | NP_011099.1 | |
| 5 | 1365 | 1365 | 78% | 0.0 | 41.94% | NP_596560.1 |