Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006228034.1
endoplasmic reticulum membrane-associated RNA degradation protein isoform X1 [Rattus norvegicus]
...
Query length:
605 aa
DOMAINS: and other(s) domains
...
endoplasmic reticulum membrane-associated RNA degradation protein isoform 4
...
endoplasmic reticulum membrane-associated RNA degradation protein isoform 4 [Homo sapiens]
605 aa protein
accession:NP_001265462.1
ER membrane associated RNA degradation isoform X13
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ER membrane associated RNA degradation isoform X13 [Mus musculus]
606 aa protein
accession:XP_036016553.1
ER membrane associated RNA degradation isoform X11
...
ER membrane associated RNA degradation isoform X11 [Mus musculus]
630 aa protein
accession:XP_006524528.1
ER membrane associated RNA degradation isoform X14
...
ER membrane associated RNA degradation isoform X14 [Mus musculus]
598 aa protein
accession:XP_030105712.1
Query: endoplasmic reticulum membrane-associated RNA degradation protein isoform X1
...
endoplasmic reticulum membrane-associated RNA degradation protein isoform X1 [Rattus norvegicus]
605 aa protein
accession:XP_006228034.1
endoplasmic reticulum membrane-associated RNA degradation protein
...
endoplasmic reticulum membrane-associated RNA degradation protein [Rattus norvegicus]
678 aa protein
accession:NP_001406549.1
DOMAINS: and other(s) domains
...
endoplasmic reticulum membrane-associated RNA degradation protein isoform 4 [Homo sapiens]
605 aa protein
accession:NP_001265462.1
ER membrane associated RNA degradation isoform X13 [Mus musculus]
606 aa protein
accession:XP_036016553.1
ER membrane associated RNA degradation isoform X11 [Mus musculus]
630 aa protein
accession:XP_006524528.1
ER membrane associated RNA degradation isoform X14 [Mus musculus]
598 aa protein
accession:XP_030105712.1
endoplasmic reticulum membrane-associated RNA degradation protein isoform X1 [Rattus norvegicus]
605 aa protein
accession:XP_006228034.1
endoplasmic reticulum membrane-associated RNA degradation protein [Rattus norvegicus]
678 aa protein
accession:NP_001406549.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1096 | 1096 | 100% | 0.0 | 85.55% | NP_001406549.1 | |
| 2 | 1072 | 1072 | 99% | 0.0 | 89.57% | XP_036016553.1 | |
| 3 | 838 | 838 | 99% | 0.0 | 70.98% | NP_001265462.1 | |
| 4 | 1068 | 1068 | 99% | 0.0 | 89.39% | XP_006524528.1 | |
| 5 | 1058 | 1058 | 98% | 0.0 | 89.60% | XP_030105712.1 |