Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_006229399.1 synemin isoform X1 [Rattus norvegicus] ... Query length: 1255 aa

synemin ...

synemin [Danio rerio]

1073 aa protein

accession:NP_001038340.1

Alignment Sequence Identical proteins

synemin isoform B ...

synemin isoform B [Homo sapiens]

1253 aa protein

accession:NP_056101.5

Alignment Sequence Identical proteins

synemin isoform M ...

synemin isoform M [Mus musculus]

1259 aa protein

accession:NP_997546.2

Alignment Sequence Identical proteins

synemin isoform H ...

synemin isoform H [Mus musculus]

1561 aa protein

accession:NP_964001.2

Alignment Sequence Identical proteins

Query: synemin isoform X1 ...

synemin isoform X1 [Rattus norvegicus]

1255 aa protein

accession:XP_006229399.1

Sequence Identical proteins

synemin ...

synemin [Rattus norvegicus]

1557 aa protein

accession:NP_001128330.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001128330.1\|	synemin [Rattus norvegicus]	2320	2516	100%	0.0	99.22%	NP_001128330.1
2 Select seq ref\|NP_997546.2\|	synemin isoform M [Mus musculus]	2179	2179	99%	0.0	89.18%	NP_997546.2
3 Select seq ref\|NP_056101.5\|	synemin isoform B [Homo sapiens]	1717	1717	100%	0.0	72.44%	NP_056101.5
4 Select seq ref\|NP_001038340.1\|	synemin [Danio rerio]	163	292	69%	4e-39	33.96%	NP_001038340.1
5 Select seq ref\|NP_964001.2\|	synemin isoform H [Mus musculus]	2007	2192	99%	0.0	88.56%	NP_964001.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments