Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006245298.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X3 [Rattus norvegicus]
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Query length:
261 aa
DOMAINS: and other(s) domains
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CTD small phosphatase-like protein 1
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CTD small phosphatase-like protein 1 [Caenorhabditis elegans]
345 aa protein
accession:NP_001370133.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2
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carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2 [Danio rerio]
265 aa protein
accession:XP_009303177.1
herzog, isoform A
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herzog, isoform A [Drosophila melanogaster]
329 aa protein
accession:NP_648825.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform 7
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carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform 7 [Homo sapiens]
261 aa protein
accession:NP_001387201.1
Query: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X3
...
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X3 [Rattus norvegicus]
261 aa protein
accession:XP_006245298.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform 3
...
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform 3 [Mus musculus]
243 aa protein
accession:NP_001408191.1
DOMAINS: and other(s) domains
...
CTD small phosphatase-like protein 1 [Caenorhabditis elegans]
345 aa protein
accession:NP_001370133.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2 [Danio rerio]
265 aa protein
accession:XP_009303177.1
herzog, isoform A [Drosophila melanogaster]
329 aa protein
accession:NP_648825.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform 7 [Homo sapiens]
261 aa protein
accession:NP_001387201.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X3 [Rattus norvegicus]
261 aa protein
accession:XP_006245298.1
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform 3 [Mus musculus]
243 aa protein
accession:NP_001408191.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 488 | 488 | 92% | 1e-176 | 98.76% | NP_001408191.1 | |
| 2 | 484 | 484 | 94% | 1e-174 | 96.34% | NP_001387201.1 | |
| 3 | 393 | 393 | 90% | 2e-138 | 79.15% | XP_009303177.1 | |
| 4 | 320 | 320 | 85% | 1e-108 | 65.94% | NP_648825.1 | |
| 5 | 270 | 270 | 88% | 1e-88 | 50.53% | NP_001370133.1 |