Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006256224.1
high mobility group protein HMG-I/HMG-Y isoform X2 [Rattus norvegicus]
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Query length:
96 aa
DOMAINS: and other(s) domains
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Transducin/WD40 repeat-like superfamily protein
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Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
815 aa protein
accession:NP_001185037.1
Zinc finger PHD-type domain-containing protein
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Zinc finger PHD-type domain-containing protein [Caenorhabditis elegans]
286 aa protein
accession:NP_503022.1
high mobility group AT-hook 1a isoform 1
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high mobility group AT-hook 1a isoform 1 [Danio rerio]
101 aa protein
accession:NP_001276836.1
Query: high mobility group protein HMG-I/HMG-Y isoform X2
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high mobility group protein HMG-I/HMG-Y isoform X2 [Rattus norvegicus]
96 aa protein
accession:XP_006256224.1
high mobility group protein HMG-I/HMG-Y isoform 2
...
high mobility group protein HMG-I/HMG-Y isoform 2 [Mus musculus]
96 aa protein
accession:NP_001159949.1
high mobility group protein HMG-I/HMG-Y isoform b
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high mobility group protein HMG-I/HMG-Y isoform b [Homo sapiens]
96 aa protein
accession:NP_001306006.1
DOMAINS: and other(s) domains
...
Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]
815 aa protein
accession:NP_001185037.1
Zinc finger PHD-type domain-containing protein [Caenorhabditis elegans]
286 aa protein
accession:NP_503022.1
high mobility group AT-hook 1a isoform 1 [Danio rerio]
101 aa protein
accession:NP_001276836.1
high mobility group protein HMG-I/HMG-Y isoform X2 [Rattus norvegicus]
96 aa protein
accession:XP_006256224.1
high mobility group protein HMG-I/HMG-Y isoform 2 [Mus musculus]
96 aa protein
accession:NP_001159949.1
high mobility group protein HMG-I/HMG-Y isoform b [Homo sapiens]
96 aa protein
accession:NP_001306006.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 166 | 166 | 100% | 3e-54 | 95.83% | NP_001306006.1 | |
| 2 | 166 | 166 | 100% | 5e-54 | 95.83% | NP_001159949.1 | |
| 3 | 69.7 | 69.7 | 80% | 9e-16 | 55.42% | NP_001276836.1 | |
| 4 | 40.8 | 40.8 | 72% | 6e-04 | 42.11% | NP_503022.1 | |
| 5 | 39.3 | 39.3 | 58% | 0.002 | 46.43% | NP_001185037.1 |