Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006521242.1
pre-mRNA-processing factor 40 homolog B isoform X3 [Mus musculus]
...
Query length:
899 aa
DOMAINS: and other(s) domains
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pre-mRNA-processing factor 40 homolog B isoform 3
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pre-mRNA-processing factor 40 homolog B isoform 3 [Homo sapiens]
893 aa protein
accession:NP_001350536.2
pre-mRNA-processing factor 40 homolog B isoform X1
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pre-mRNA-processing factor 40 homolog B isoform X1 [Mus musculus]
903 aa protein
accession:XP_011243999.1
pre-mRNA-processing factor 40 homolog B isoform 5
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pre-mRNA-processing factor 40 homolog B isoform 5 [Mus musculus]
892 aa protein
accession:NP_001357563.1
Query: pre-mRNA-processing factor 40 homolog B isoform X3
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pre-mRNA-processing factor 40 homolog B isoform X3 [Mus musculus]
899 aa protein
accession:XP_006521242.1
pre-mRNA-processing factor 40 homolog B isoform X4
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pre-mRNA-processing factor 40 homolog B isoform X4 [Mus musculus]
898 aa protein
accession:XP_006521243.1
pre-mRNA-processing factor 40 homolog B isoform X2
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pre-mRNA-processing factor 40 homolog B isoform X2 [Mus musculus]
902 aa protein
accession:XP_006521241.1
DOMAINS: and other(s) domains
...
pre-mRNA-processing factor 40 homolog B isoform 3 [Homo sapiens]
893 aa protein
accession:NP_001350536.2
pre-mRNA-processing factor 40 homolog B isoform X1 [Mus musculus]
903 aa protein
accession:XP_011243999.1
pre-mRNA-processing factor 40 homolog B isoform 5 [Mus musculus]
892 aa protein
accession:NP_001357563.1
pre-mRNA-processing factor 40 homolog B isoform X3 [Mus musculus]
899 aa protein
accession:XP_006521242.1
pre-mRNA-processing factor 40 homolog B isoform X4 [Mus musculus]
898 aa protein
accession:XP_006521243.1
pre-mRNA-processing factor 40 homolog B isoform X2 [Mus musculus]
902 aa protein
accession:XP_006521241.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 1818 | 1818 | 100% | 0.0 | 99.56% | XP_011243999.1 | |
2 | 1721 | 1721 | 99% | 0.0 | 95.53% | NP_001350536.2 | |
3 | 1815 | 1815 | 100% | 0.0 | 99.89% | XP_006521243.1 | |
4 | 1811 | 1811 | 100% | 0.0 | 99.45% | XP_006521241.1 | |
5 | 1808 | 1808 | 99% | 0.0 | 100.00% | NP_001357563.1 |