Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006523430.1
uncharacterized protein LOC100041574 isoform X3 [Mus musculus]
...
Query length:
430 aa
DOMAINS: and other(s) domains
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endoplasmic reticulum membrane-associated RNA degradation protein isoform 4
...
endoplasmic reticulum membrane-associated RNA degradation protein isoform 4 [Homo sapiens]
605 aa protein
accession:NP_001265462.1
endoplasmic reticulum membrane-associated RNA degradation protein
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endoplasmic reticulum membrane-associated RNA degradation protein [Rattus norvegicus]
678 aa protein
accession:NP_001406549.1
uncharacterized protein LOC100041574
...
uncharacterized protein LOC100041574 [Mus musculus]
438 aa protein
accession:NP_001116842.1
Query: uncharacterized protein LOC100041574 isoform X3
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uncharacterized protein LOC100041574 isoform X3 [Mus musculus]
430 aa protein
accession:XP_006523430.1
uncharacterized protein LOC100041574 isoform X2
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uncharacterized protein LOC100041574 isoform X2 [Mus musculus]
437 aa protein
accession:XP_006523429.1
uncharacterized protein LOC100041574 isoform X1
...
uncharacterized protein LOC100041574 isoform X1 [Mus musculus]
462 aa protein
accession:XP_006523428.1
DOMAINS: and other(s) domains
...
endoplasmic reticulum membrane-associated RNA degradation protein isoform 4 [Homo sapiens]
605 aa protein
accession:NP_001265462.1
endoplasmic reticulum membrane-associated RNA degradation protein [Rattus norvegicus]
678 aa protein
accession:NP_001406549.1
uncharacterized protein LOC100041574 [Mus musculus]
438 aa protein
accession:NP_001116842.1
uncharacterized protein LOC100041574 isoform X3 [Mus musculus]
430 aa protein
accession:XP_006523430.1
uncharacterized protein LOC100041574 isoform X2 [Mus musculus]
437 aa protein
accession:XP_006523429.1
uncharacterized protein LOC100041574 isoform X1 [Mus musculus]
462 aa protein
accession:XP_006523428.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 887 | 887 | 100% | 0.0 | 100.00% | XP_006523429.1 | |
| 2 | 715 | 715 | 93% | 0.0 | 90.32% | NP_001406549.1 | |
| 3 | 613 | 613 | 93% | 0.0 | 73.70% | NP_001265462.1 | |
| 4 | 887 | 887 | 100% | 0.0 | 100.00% | XP_006523428.1 | |
| 5 | 887 | 887 | 100% | 0.0 | 100.00% | NP_001116842.1 |